Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 6.8e-228 793.9 472 100.0
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 7.3e-214 747.3 476 91.8
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.4e-132 477.2 471 66.7
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 4.1e-132 475.7 487 63.4
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 4.1e-132 475.7 482 67.0
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.7e-131 473.0 491 62.3
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.5e-129 467.2 422 71.1
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 1.2e-128 464.2 484 68.8
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.6e-128 463.8 464 67.0
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 1.6e-128 463.8 455 67.3
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.1e-128 463.4 493 61.7
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 2.8e-128 463.0 483 64.8
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 6.1e-128 461.8 418 69.6
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 5.2e-127 458.8 478 65.1
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 8.9e-127 458.0 474 65.6
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.0e-126 456.8 421 69.4
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 2.2e-125 453.4 493 62.3
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 3.7e-125 452.6 421 69.4
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 4.9e-125 452.2 414 67.6
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 6.3e-125 451.8 439 65.4
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 8.3e-125 451.4 422 70.4
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 4.1e-124 449.1 412 68.2
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 9.2e-124 448.0 487 64.1
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 9.2e-124 448.0 376 74.7
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.6e-123 447.2 481 65.5
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 4.5e-123 445.7 412 68.2
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 5.9e-123 445.3 422 70.1
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.3e-122 444.1 415 67.0
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 3.8e-122 442.6 469 67.4
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 5.0e-122 442.2 416 67.1
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 6.6e-122 441.8 420 66.0
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 3.3e-121 439.5 490 62.4
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 3.3e-121 439.5 425 65.9
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 5.6e-121 438.7 423 66.9
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.2e-120 437.6 418 68.7
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.8e-120 436.4 427 67.9
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 3.6e-120 436.0 478 64.2
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 4.7e-120 435.6 409 64.3
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 8.0e-120 434.9 411 66.2
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.4e-119 434.1 421 66.0
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 4.0e-119 432.6 421 65.3
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 5.2e-119 432.2 422 67.1
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 5.2e-119 432.2 423 64.5
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 2.0e-118 430.3 417 67.9
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 2.0e-118 430.3 413 66.6
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 6.4e-117 425.2 415 67.5
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 2.4e-116 423.3 414 65.7
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 2.4e-116 423.3 426 62.7
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 2.4e-116 423.3 413 65.4
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 4.1e-116 422.5 425 60.5
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.0e-114 417.9 415 64.3
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.6e-114 415.2 421 66.0
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 1.9e-113 413.7 502 54.8
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 3.3e-113 412.9 419 64.9
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 7.3e-113 411.8 395 69.4
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 4.7e-112 409.1 428 62.9
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 5.2e-111 405.6 377 67.9
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 5.2e-111 405.6 405 67.9
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 8.9e-111 404.8 413 65.4
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 8.9e-111 404.8 485 61.0
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.5e-110 404.1 481 58.2
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 3.4e-110 402.9 469 60.6
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 8.3e-109 398.3 417 62.1
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 2.4e-108 396.7 425 61.6
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 7.0e-108 395.2 425 60.2
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 9.2e-108 394.8 419 61.6
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 3.5e-107 392.9 414 61.4
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 3.5e-107 392.9 658 46.8
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 1.0e-106 391.3 420 61.9
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 1.3e-106 391.0 424 62.3
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 3.9e-106 389.4 477 61.2
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 3.9e-106 389.4 430 61.9
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 1.1e-105 387.9 422 61.4
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-105 387.1 417 61.2
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 5.6e-105 385.6 418 61.5
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.2e-104 384.4 412 62.1
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 3.6e-104 382.9 420 61.0
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 8.1e-104 381.7 495 59.0
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 6.8e-103 378.6 430 59.3
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 6.8e-103 378.6 430 59.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.0e-102 377.1 425 59.8
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 4.4e-102 375.9 419 60.9
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 3.7e-101 372.9 424 60.6
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 3.2e-100 369.8 472 61.9
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 7.8e-99 365.2 420 59.3
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 7.8e-99 365.2 428 56.3
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 1.2e-91 341.3 406 58.4
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.7e-91 340.1 421 55.1
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.7e-91 340.1 421 55.1
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 3.5e-91 339.7 371 59.6
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 4.3e-89 332.8 369 60.2
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 7.3e-89 332.0 421 53.9
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 2.8e-88 330.1 410 54.4
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 4.7e-88 329.3 409 52.3
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.1e-87 328.2 284 66.9
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 7.8e-83 312.0 291 67.7
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 6.6e-82 308.9 282 66.0
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.9e-81 307.4 374 59.4
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 9.0e-79 298.5 292 62.7
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 1.9e-76 290.8 291 64.9
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 9.3e-76 288.5 324 60.5
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 1.3e-74 284.6 414 50.7
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 5.1e-74 282.7 341 52.8
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 2.5e-73 280.4 285 62.5
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 3.3e-73 280.0 418 51.7
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 5.6e-73 279.3 630 43.3
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.4e-71 274.6 277 65.3
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 5.1e-66 256.1 315 59.0
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.1e-60 238.4 186 72.0
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 2.7e-59 233.8 321 50.2
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.3e-58 231.5 380 48.7
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-57 227.6 417 47.5
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 4.6e-51 206.5 254 68.1
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 3.3e-49 200.3 357 49.3
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 8.2e-48 195.7 488 37.9
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 1.2e-38 165.2 102 84.3
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.0e-34 152.1 196 51.5
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.5e-33 148.3 119 73.9
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 7.4e-33 146.0 363 32.5
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 3.1e-31 140.6 115 67.0
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 2.0e-30 137.9 87 83.9
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 6.5e-29 132.9 315 42.5
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 6.8e-26 122.9 160 61.9
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 4.5e-22 110.2 58 87.9
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 5.9e-22 109.8 95 77.9
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 2.9e-21 107.5 79 73.4
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.6e-19 100.5 92 76.1
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 2.3e-18 97.8 90 72.2
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.3e-16 92.0 96 60.4
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 6.3e-16 89.7 79 64.6
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 8.3e-16 89.4 64 75.0
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 6.6e-13 79.7 181 47.0
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.7e-11 73.6 88 52.3
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 2.2e-08 64.7 39 87.2
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 3.7e-08 63.9 100 36.0
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 3.2e-07 60.8 43 69.8


User provided reference genes

Program Settings