Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.6e-175 618.6 310 100.0
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.9e-162 575.9 331 89.7
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 5.1e-115 418.3 332 67.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-111 407.1 303 68.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.0e-111 406.4 303 68.6
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.8e-111 404.8 333 64.6
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.3e-110 403.7 303 68.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 8.4e-110 401.0 324 66.4
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.4e-109 400.2 334 64.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.3e-109 397.5 320 65.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.2e-108 397.1 282 71.3
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.7e-108 396.0 321 65.1
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.6e-108 395.2 334 63.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.3e-107 393.7 334 65.3
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.0e-107 392.5 282 70.2
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 3.0e-107 392.5 324 64.5
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 6.7e-107 391.3 318 64.5
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.1e-106 390.6 329 64.4
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.5e-106 389.4 323 65.3
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.3e-106 389.0 325 64.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.4e-106 387.9 329 63.5
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 9.7e-106 387.5 327 63.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.6e-105 386.7 279 69.5
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.8e-105 386.0 329 63.5
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 3.7e-105 385.6 326 62.9
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 6.3e-105 384.8 331 64.4
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.1e-104 384.0 325 63.1
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.1e-104 384.0 331 62.5
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.1e-104 384.0 326 62.3
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.4e-104 383.6 320 63.4
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.8e-104 383.3 320 62.5
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 2.4e-104 382.9 331 62.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.4e-104 382.9 285 67.4
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.2e-103 380.6 311 65.6
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.5e-103 380.2 318 63.2
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.5e-103 380.2 331 61.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.5e-103 380.2 285 66.7
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.0e-103 379.8 341 61.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 4.5e-103 378.6 328 60.4
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 5.9e-103 378.3 297 66.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.3e-102 377.1 307 63.5
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.3e-102 377.1 320 62.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.7e-102 376.7 323 62.2
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 5.0e-102 375.2 304 64.1
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 8.5e-102 374.4 338 59.8
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.1e-101 374.0 325 61.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.9e-101 373.2 326 61.7
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.5e-101 372.9 324 61.4
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.2e-100 370.5 279 68.5
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.1e-100 369.8 298 64.1
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.1e-100 369.8 315 61.9
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.7e-100 369.4 312 62.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 7.9e-100 367.9 310 62.9
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.3e-99 367.1 280 67.9
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.8e-99 366.7 309 63.1
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.9e-99 365.5 332 59.6
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 5.1e-99 365.2 303 64.7
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 5.1e-99 365.2 324 59.9
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 6.7e-99 364.8 276 67.4
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 8.7e-99 364.4 309 61.8
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.1e-98 364.0 336 59.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.5e-98 363.6 315 60.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.5e-98 363.6 330 60.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.9e-98 363.2 385 54.5
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.9e-98 363.2 311 60.5
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.9e-98 363.2 264 68.6
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.5e-98 362.8 279 65.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.7e-98 361.7 315 59.7
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 7.4e-98 361.3 317 59.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 9.7e-98 360.9 339 58.1
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.3e-97 360.5 296 64.2
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.2e-97 359.8 379 54.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.8e-97 359.4 309 60.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.4e-96 356.3 256 72.3
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 4.1e-96 355.5 309 60.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.3e-96 355.1 316 59.5
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.9e-96 354.8 309 60.2
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 6.9e-96 354.8 325 60.6
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.4e-95 352.4 309 59.9
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 5.9e-95 351.7 327 58.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.7e-94 350.1 257 67.7
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.9e-94 349.4 315 59.0
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 5.0e-94 348.6 288 62.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 6.5e-94 348.2 280 65.0
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.4e-93 347.1 300 60.0
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.2e-92 344.0 256 68.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 6.1e-92 341.7 259 65.3
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 7.9e-92 341.3 331 57.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.0e-91 339.3 266 63.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.8e-88 330.1 284 63.4
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 5.3e-88 328.6 308 58.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.3e-88 328.6 417 46.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.1e-85 320.9 299 57.2
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 6.1e-76 288.5 259 52.5
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.0e-75 286.2 273 59.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.2e-74 284.3 303 48.2
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 8.5e-70 268.1 275 50.9
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.1e-69 267.7 300 48.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 8.0e-68 261.5 267 48.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.3e-65 254.2 279 49.5
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 4.1e-64 249.2 302 50.0
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.0e-60 235.0 147 75.5
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.6e-58 229.9 134 83.6
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.7e-57 226.1 141 78.0
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.5e-53 214.2 135 76.3
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 6.8e-51 205.3 157 63.7
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.0e-47 193.7 134 64.9
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.7e-46 190.7 208 53.4
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.1e-45 188.0 266 38.0
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.1e-45 188.0 256 44.1
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.6e-28 131.0 254 33.1
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.5e-26 124.4 306 30.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 3.2e-24 116.7 232 31.5
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.8e-20 103.6 97 57.7
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.0e-14 85.1 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.3e-13 79.7 52 69.2


User provided reference genes

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