Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 6.0e-163 577.4 284 100.0
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 5.7e-121 438.0 271 81.2
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 5.0e-85 318.5 297 60.6
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 7.3e-84 314.7 297 59.9
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 1.4e-66 257.3 294 52.0
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 2.4e-66 256.5 294 53.7
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.6e-65 253.1 294 50.0
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 4.8e-59 232.3 297 48.8
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 1.9e-55 220.3 295 44.4
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 3.2e-55 219.5 293 44.7
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 5.4e-55 218.8 293 44.4
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.2e-54 217.6 293 46.1
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.2e-54 217.6 293 46.1
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 3.0e-53 213.0 295 45.1
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.5e-52 210.7 294 43.5
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 3.3e-52 209.5 295 44.7
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 5.6e-52 208.8 297 45.5
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 7.4e-52 208.4 297 41.4
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 7.4e-52 208.4 294 43.2
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 9.6e-52 208.0 302 44.4
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 9.6e-52 208.0 295 43.4
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 1.3e-51 207.6 293 43.7
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.6e-51 207.2 302 44.0
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 1.6e-51 207.2 296 42.2
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 2.8e-51 206.5 294 42.5
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.6e-51 206.1 293 41.3
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.6e-51 206.1 293 41.6
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 6.2e-51 205.3 293 41.0
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 1.1e-50 204.5 295 43.7
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 1.8e-50 203.8 296 42.2
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 1.8e-50 203.8 295 41.7
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 2.4e-50 203.4 292 41.1
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 3.1e-50 203.0 297 39.7
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 3.1e-50 203.0 292 44.2
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 4.0e-50 202.6 294 43.2
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 4.0e-50 202.6 294 41.5
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 4.0e-50 202.6 290 41.4
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 9.0e-50 201.4 295 43.4
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.2e-49 201.1 299 43.1
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.2e-49 201.1 299 43.1
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.5e-49 200.7 292 42.1
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 2.6e-49 199.9 294 41.5
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 3.4e-49 199.5 296 41.6
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 4.5e-49 199.1 296 42.2
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 4.5e-49 199.1 293 42.7
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 4.5e-49 199.1 285 41.8
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 4.5e-49 199.1 295 42.7
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 5.8e-49 198.7 295 42.0
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 5.8e-49 198.7 293 41.6
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 5.8e-49 198.7 300 41.0
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 7.6e-49 198.4 294 41.2
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 1.3e-48 197.6 292 40.8
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 1.7e-48 197.2 293 42.3
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 2.2e-48 196.8 294 44.2
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 2.2e-48 196.8 294 44.2
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 2.2e-48 196.8 294 44.2
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 3.8e-48 196.1 296 40.5
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 3.8e-48 196.1 295 41.0
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 4.9e-48 195.7 296 40.9
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 6.4e-48 195.3 295 40.0
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 1.4e-47 194.1 286 45.1
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.4e-47 194.1 292 40.4
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 2.4e-47 193.4 300 39.0
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 2.4e-47 193.4 296 39.9
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 4.2e-47 192.6 286 44.8
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.2e-47 192.6 292 40.4
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 5.5e-47 192.2 299 40.8
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 5.5e-47 192.2 293 41.6
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 9.3e-47 191.4 287 46.0
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 1.2e-46 191.0 297 41.1
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 2.7e-46 189.9 277 44.0
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.7e-46 189.9 286 45.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.7e-46 189.9 286 45.1
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 4.6e-46 189.1 276 40.6
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 1.0e-45 188.0 277 41.5
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 1.3e-45 187.6 247 46.6
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.3e-45 186.8 275 40.4
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 3.0e-45 186.4 295 40.3
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 3.0e-45 186.4 291 40.2
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 5.1e-45 185.7 297 37.7
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 1.1e-44 184.5 294 43.9
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 4.3e-44 182.6 295 39.0
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 7.4e-44 181.8 293 42.3
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 9.6e-44 181.4 276 42.4
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 2.1e-43 180.3 297 39.4
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 4.8e-43 179.1 296 39.2
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 6.2e-43 178.7 294 41.2
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 3.1e-42 176.4 292 40.1
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 5.8e-41 172.2 296 39.2
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 1.7e-40 170.6 286 38.1
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 2.2e-40 170.2 292 39.7
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 3.8e-40 169.5 271 43.2
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 2.7e-38 163.3 230 45.7
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 2.0e-33 147.1 224 41.5
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 6.1e-30 135.6 244 36.9
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 1.5e-28 131.0 221 38.9
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 3.3e-28 129.8 216 38.9
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.8e-26 124.0 205 38.0
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 3.9e-21 106.3 294 30.3
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 6.7e-21 105.5 284 29.9
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 2.6e-20 103.6 293 26.3
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 3.3e-20 103.2 132 47.0
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 9.7e-20 101.7 295 28.5
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 1.1e-18 98.2 106 48.1
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 3.1e-18 96.7 127 43.3
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 3.4e-17 93.2 103 48.5
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.0e-16 91.7 103 48.5
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 1.3e-16 91.3 199 32.7
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 9.4e-07 58.5 86 43.0


User provided reference genes

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