Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 2.2e-146 522.3 277 100.0
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 1.4e-132 476.5 277 90.3
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 3.1e-132 475.3 277 90.3
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 2.5e-113 412.5 273 78.0
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 4.3e-113 411.8 274 76.3
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 4.3e-113 411.8 277 77.3
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 7.3e-113 411.0 274 76.3
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 8.1e-112 407.5 277 75.1
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 1.2e-110 403.7 276 76.4
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 2.0e-110 402.9 272 76.8
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 7.5e-110 401.0 273 74.0
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.3e-109 400.2 272 74.6
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 2.2e-109 399.4 274 74.1
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 2.9e-109 399.1 269 75.5
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 6.4e-109 397.9 272 76.5
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 8.3e-109 397.5 269 75.1
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 1.1e-108 397.1 277 73.6
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 1.4e-108 396.7 274 75.2
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 4.1e-108 395.2 272 75.0
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 1.2e-107 393.7 275 73.8
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 1.6e-107 393.3 272 74.6
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.6e-107 393.3 274 71.9
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.6e-107 393.3 274 71.9
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 1.6e-107 393.3 274 73.0
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 2.1e-107 392.9 277 74.7
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 2.1e-107 392.9 277 74.7
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 2.1e-107 392.9 277 73.3
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 4.6e-107 391.7 277 74.0
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 6.0e-107 391.3 271 74.2
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.7e-106 389.8 274 71.5
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 1.7e-106 389.8 270 73.0
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 2.3e-106 389.4 281 72.2
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 2.3e-106 389.4 277 72.9
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.0e-106 389.0 277 73.3
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 3.9e-106 388.7 277 74.7
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 5.1e-106 388.3 272 72.1
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 5.1e-106 388.3 272 72.4
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 8.6e-106 387.5 274 71.9
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 1.5e-105 386.7 273 72.5
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 1.5e-105 386.7 274 73.0
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.5e-105 386.7 274 70.8
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 1.5e-105 386.7 271 73.4
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 1.9e-105 386.3 274 71.5
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 3.3e-105 385.6 288 71.2
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 4.3e-105 385.2 275 73.1
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 1.2e-104 383.6 275 73.1
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 1.2e-104 383.6 277 71.5
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 2.1e-104 382.9 272 73.2
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 2.8e-104 382.5 275 72.7
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 3.6e-104 382.1 277 70.4
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 4.7e-104 381.7 294 68.7
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 8.1e-104 380.9 277 70.0
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 8.1e-104 380.9 270 71.9
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 1.8e-103 379.8 275 71.3
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 2.3e-103 379.4 274 72.3
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 2.3e-103 379.4 278 71.2
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 3.1e-103 379.0 271 72.3
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.1e-103 379.0 282 69.5
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 8.9e-103 377.5 277 69.3
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 8.9e-103 377.5 272 72.4
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 1.2e-102 377.1 270 70.7
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 1.5e-102 376.7 272 72.4
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 2.0e-102 376.3 270 71.9
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 3.4e-102 375.6 270 71.1
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 3.4e-102 375.6 271 70.8
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 4.4e-102 375.2 272 71.3
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 1.3e-101 373.6 269 72.1
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 1.7e-101 373.2 270 70.7
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 2.9e-101 372.5 271 70.5
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 4.9e-101 371.7 274 70.4
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 4.9e-101 371.7 274 70.4
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 8.4e-101 370.9 274 70.8
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 8.4e-101 370.9 269 71.4
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.4e-100 370.2 274 70.8
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 1.4e-100 370.2 274 70.4
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 1.4e-100 370.2 274 70.1
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 2.4e-100 369.4 275 69.1
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 3.2e-100 369.0 275 69.5
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 3.2e-100 369.0 275 69.1
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 3.2e-100 369.0 275 69.1
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 4.1e-100 368.6 269 71.0
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 5.4e-100 368.2 274 70.4
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 5.4e-100 368.2 369 58.3
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 9.2e-100 367.5 273 71.1
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 9.2e-100 367.5 274 69.7
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 1.2e-99 367.1 270 70.7
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 1.2e-99 367.1 270 70.0
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 1.6e-99 366.7 274 70.1
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 1.6e-99 366.7 275 68.7
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 1.6e-99 366.7 274 69.7
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 3.5e-99 365.5 271 69.0
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 4.6e-99 365.2 274 69.7
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.0e-98 364.0 301 65.4
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 1.3e-98 363.6 275 68.4
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.3e-98 363.6 271 70.5
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 1.3e-98 363.6 276 69.2
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 3.0e-98 362.5 272 69.5
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 3.0e-98 362.5 272 69.5
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 3.0e-98 362.5 272 69.5
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 3.9e-98 362.1 272 69.1
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.9e-98 362.1 264 71.6
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 5.1e-98 361.7 284 66.9
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 9.6e-97 357.5 271 69.0
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 2.1e-96 356.3 335 60.3
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 8.1e-96 354.4 276 67.8
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 1.4e-95 353.6 253 71.9
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 2.6e-94 349.4 327 61.2
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 5.8e-94 348.2 272 67.6
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 1.2e-91 340.5 265 66.4
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 1.2e-91 340.5 265 66.4
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 1.6e-91 340.1 316 59.5
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 6.0e-91 338.2 278 66.9
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 1.6e-88 330.1 256 68.0
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 2.2e-85 319.7 270 60.0
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 6.4e-85 318.2 263 62.0
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 7.9e-83 311.2 270 58.9
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.3e-82 310.5 488 43.0
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 3.9e-82 308.9 488 42.8
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 3.1e-79 299.3 263 59.7
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 5.3e-79 298.5 275 57.5
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 4.5e-78 295.4 263 59.7
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 9.9e-78 294.3 273 59.7
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 1.3e-77 293.9 265 59.2
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 9.3e-76 287.7 211 71.1
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 6.9e-71 271.6 250 59.2
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 7.6e-70 268.1 262 53.8
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 1.3e-69 267.3 253 57.7
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 6.5e-69 265.0 278 51.1
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 6.0e-67 258.5 280 52.9
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 1.3e-66 257.3 256 56.6
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 1.8e-66 256.9 277 53.4
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 2.3e-66 256.5 257 56.8
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 3.0e-66 256.1 276 50.4
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 2.5e-65 253.1 277 52.7
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 2.8e-64 249.6 280 51.8
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 5.9e-62 241.9 164 75.0
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 1.7e-61 240.4 258 56.2
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.0e-61 238.8 296 50.0
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 6.5e-61 238.4 255 54.1
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 5.5e-60 235.3 224 58.0
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 7.9e-59 231.5 266 48.9
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 1.9e-57 226.9 279 49.8
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 4.8e-56 222.2 254 50.8
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 4.8e-56 222.2 273 48.4
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 3.6e-51 206.1 147 68.7
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 6.5e-45 185.3 131 73.3
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-44 184.5 249 45.0
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-44 184.5 268 45.5
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 4.8e-40 169.1 131 67.9
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.4e-39 166.8 135 65.9
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.1e-39 166.4 147 60.5
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.5e-38 162.9 131 64.9
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 4.5e-38 162.5 162 58.6
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.1e-35 153.7 164 54.9
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 2.1e-35 153.7 96 79.2
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 2.7e-35 153.3 229 42.4
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 1.8e-34 150.6 138 55.8
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 7.5e-33 145.2 102 73.5
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 1.7e-29 134.0 124 58.9
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 1.8e-26 124.0 265 32.1
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 2.2e-24 117.1 142 50.0
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 8.3e-24 115.2 262 30.9
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.1e-23 113.2 150 48.7
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 1.2e-22 111.3 284 28.5
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 4.7e-19 99.4 73 72.6
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 2.8e-16 90.1 65 66.2
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 2.0e-14 84.0 51 82.4
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 2.7e-14 83.6 51 80.4
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 2.7e-14 83.6 51 80.4
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 2.7e-14 83.6 80 50.0
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.5e-14 82.8 59 71.2
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 5.9e-14 82.4 51 80.4
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 7.7e-14 82.0 58 65.5
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 1.3e-13 81.3 63 65.1
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.3e-13 81.3 63 65.1
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 2.9e-13 80.1 51 78.4
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 5.0e-13 79.3 70 57.1
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 1.1e-12 78.2 49 77.6
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 1.5e-12 77.8 68 55.9
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 1.5e-12 77.8 63 61.9
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.9e-12 77.4 63 61.9
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 5.6e-12 75.9 53 64.2
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 5.6e-12 75.9 70 57.1
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-07 60.5 55 54.5


User provided reference genes

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