Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 2.5e-96 355.5 192 100.0
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 6.2e-95 350.9 193 99.5
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.7e-92 342.8 192 97.4
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-30 137.1 185 51.4
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.4e-30 136.3 185 50.8
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.3e-28 130.6 185 48.6
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 6.5e-28 128.3 183 48.6
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.5e-27 127.1 183 47.5
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 3.6e-26 122.5 185 46.5
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 6.1e-26 121.7 198 46.0
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-25 120.6 187 46.5
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.8e-25 120.2 186 45.2
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 4.8e-23 112.1 188 45.2
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 6.3e-23 111.7 188 44.1
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 6.3e-23 111.7 193 43.0
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.8e-22 110.2 182 44.0
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 3.1e-22 109.4 185 43.2
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 4.1e-22 109.0 203 39.9
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 4.1e-22 109.0 192 44.3
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.2e-21 107.5 199 43.2
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 3.5e-21 105.9 180 41.7
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.5e-21 105.5 180 40.6
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 4.5e-21 105.5 186 43.5
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.7e-21 104.8 180 40.6
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.7e-21 104.8 180 40.6
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.3e-20 104.0 201 39.8
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 1.3e-20 104.0 201 39.8
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.7e-20 103.6 189 39.7
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.7e-20 103.6 198 41.9
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.5e-19 99.8 189 39.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 3.3e-19 99.4 203 40.9
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 4.2e-19 99.0 191 39.8
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 4.2e-19 99.0 187 40.1
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 1.2e-18 97.4 196 39.3
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 1.2e-18 97.4 184 39.7
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 1.6e-18 97.1 184 44.0
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 2.1e-18 96.7 195 41.0
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 8.0e-18 94.7 180 47.2
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 8.0e-18 94.7 190 40.5
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.0e-17 94.4 199 42.7
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 1.8e-17 93.6 180 37.2
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 2.3e-17 93.2 188 39.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 3.0e-17 92.8 187 42.2
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 5.2e-17 92.0 189 41.3
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 6.8e-17 91.7 205 37.6
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 6.8e-17 91.7 183 41.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 8.9e-17 91.3 189 41.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 8.9e-17 91.3 185 43.2
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 1.2e-16 90.9 188 39.4
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.5e-16 90.5 199 38.2
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 2.0e-16 90.1 147 42.9
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.0e-16 90.1 191 38.2
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 2.6e-16 89.7 188 39.9
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 3.4e-16 89.4 184 37.0
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 3.4e-16 89.4 194 36.6
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 4.4e-16 89.0 179 39.7
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.3e-15 87.4 185 35.1
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.3e-15 87.4 189 39.7
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 3.7e-15 85.9 184 38.0
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 6.3e-15 85.1 184 34.8
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.4e-14 84.0 184 39.7
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.8e-14 83.6 187 38.0
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 2.4e-14 83.2 184 35.9
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 3.1e-14 82.8 184 35.9
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 7.0e-14 81.6 185 40.0
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 7.0e-14 81.6 180 35.6
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 9.2e-14 81.3 185 34.6
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 2.7e-13 79.7 197 37.6
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 3.5e-13 79.3 194 36.1
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.9e-12 76.3 179 36.9
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 5.0e-12 75.5 181 35.9
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 5.0e-12 75.5 188 34.0
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 3.3e-11 72.8 185 39.5
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.3e-11 72.4 181 39.2
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 7.3e-11 71.6 189 32.8
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 9.5e-11 71.2 132 37.1
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 2.1e-10 70.1 199 35.7
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 2.8e-10 69.7 189 32.8
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 1.4e-09 67.4 178 37.6
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.8e-09 67.0 169 37.3
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 2.0e-08 63.5 185 33.5
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 3.4e-08 62.8 144 36.8
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 9.8e-08 61.2 176 33.5
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 2.9e-07 59.7 187 33.7
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 4.9e-07 58.9 185 36.2
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 8.3e-07 58.2 114 44.7
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 1.1e-06 57.8 166 30.1
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 5.4e-06 55.5 190 36.8
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 7.0e-06 55.1 183 33.3


User provided reference genes

Program Settings