Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0806 Papaver somniferum HOM05D004264 ORTHO05D004680 3.9e-42 174.5 93 100.0
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 3.9e-26 121.3 67 92.5
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 4.3e-25 117.9 67 91.0
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 5.6e-17 90.9 66 69.7
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 1.6e-16 89.4 66 65.2
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 3.6e-16 88.2 80 53.8
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.8e-15 85.9 66 62.1
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 3.1e-15 85.1 66 63.6
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 3.1e-15 85.1 66 65.2
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 1.2e-14 83.2 65 58.5
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 2.0e-14 82.4 73 56.2
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.4e-14 81.6 65 58.5
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.4e-14 81.6 65 58.5
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.4e-14 81.6 65 58.5
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 5.8e-14 80.9 76 53.9
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 5.8e-14 80.9 69 56.5
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 9.9e-14 80.1 66 59.1
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 9.9e-14 80.1 66 59.1
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 9.9e-14 80.1 66 57.6
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 1.7e-13 79.3 76 56.6
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 2.2e-13 79.0 66 57.6
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 2.9e-13 78.6 68 55.9
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.9e-13 78.6 73 56.2
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 3.8e-13 78.2 65 52.3
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 6.4e-13 77.4 67 53.7
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 6.4e-13 77.4 84 51.2
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 8.4e-13 77.0 70 58.6
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 8.4e-13 77.0 73 56.2
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 8.4e-13 77.0 77 44.2
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 8.4e-13 77.0 66 57.6
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 2.4e-12 75.5 64 54.7
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 3.2e-12 75.1 73 52.1
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 3.2e-12 75.1 66 54.5
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 7.1e-12 73.9 66 57.6
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 7.1e-12 73.9 66 51.5
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 2.1e-11 72.4 65 52.3
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 3.5e-11 71.6 66 50.0
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 1.3e-10 69.7 65 49.2
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 1.7e-10 69.3 66 51.5
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 1.7e-10 69.3 66 47.0
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.3e-10 68.9 66 50.0
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 2.3e-10 68.9 59 57.6
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 2.3e-10 68.9 66 50.0
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 3.0e-10 68.6 75 42.7
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 3.0e-10 68.6 65 49.2
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.0e-10 68.6 73 46.6
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 3.0e-10 68.6 64 51.6
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 3.0e-10 68.6 84 47.6
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 5.1e-10 67.8 66 48.5
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 5.1e-10 67.8 66 47.0
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.1e-10 67.8 73 46.6
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 5.1e-10 67.8 66 50.0
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 6.6e-10 67.4 66 47.0
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 6.6e-10 67.4 73 45.2
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 6.6e-10 67.4 64 50.0
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 6.6e-10 67.4 66 50.0
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 6.6e-10 67.4 61 54.1
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 8.7e-10 67.0 66 45.5
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 8.7e-10 67.0 73 45.2
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 8.7e-10 67.0 73 45.2
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 3.3e-09 65.1 66 47.0
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 3.3e-09 65.1 61 50.8
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 3.3e-09 65.1 91 36.3
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 5.6e-09 64.3 68 48.5
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 7.3e-09 63.9 68 45.6
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.6e-08 62.8 66 42.4
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 2.8e-08 62.0 57 54.4
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 4.8e-08 61.2 53 54.7
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 4.8e-08 61.2 64 48.4
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 6.2e-08 60.8 66 40.9
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 6.2e-08 60.8 66 40.9
CAN.G564.4 Capsicum annuum HOM05D004264 ORTHO05D004680 6.2e-08 60.8 58 51.7
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 6.2e-08 60.8 65 44.6
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 2.4e-07 58.9 55 52.7
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 2.4e-07 58.9 55 52.7
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.4e-07 58.9 59 52.5
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 3.1e-07 58.5 65 43.1
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 3.1e-07 58.5 66 40.9
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.1e-07 58.5 66 45.5
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 5.3e-07 57.8 65 43.1
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.0e-06 55.8 65 41.5
unitig_88.g27662 Utricularia gibba HOM05D004264 ORTHO05D004680 2.6e-06 55.5 56 53.6
BcaB04g18568 Brassica carinata HOM05D004264 ORTHO05D004680 5.8e-06 54.3 55 45.5
BcaC01g04201 Brassica carinata HOM05D004264 ORTHO05D004680 5.8e-06 54.3 55 45.5
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 5.8e-06 54.3 61 42.6


User provided reference genes

Program Settings