Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 6.1e-180 634.0 317 100.0
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 2.3e-179 632.1 317 99.7
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 1.8e-163 579.3 317 91.5
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 4.4e-162 574.7 317 90.2
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 2.8e-161 572.0 317 89.6
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 2.8e-161 572.0 315 90.2
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 2.4e-160 568.9 315 90.5
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 2.4e-160 568.9 317 89.6
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.6e-159 566.2 330 86.4
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 2.6e-159 565.5 315 89.5
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 2.6e-159 565.5 315 89.8
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 7.7e-159 563.9 317 88.3
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 1.3e-158 563.1 317 89.0
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 1.3e-158 563.1 315 88.6
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 2.2e-158 562.4 317 89.0
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 6.5e-158 560.8 317 88.6
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 1.1e-157 560.1 315 88.9
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 1.5e-157 559.7 317 88.3
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.9e-157 559.3 315 87.9
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.5e-157 558.9 315 87.9
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 5.5e-157 557.8 315 87.6
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 7.2e-157 557.4 315 88.6
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 9.4e-157 557.0 315 87.6
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 1.2e-156 556.6 317 87.7
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 1.2e-156 556.6 315 87.6
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 2.1e-156 555.8 315 86.7
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 4.7e-156 554.7 315 87.6
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 6.1e-156 554.3 315 87.3
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 6.1e-156 554.3 315 87.3
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 6.1e-156 554.3 316 87.3
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 8.0e-156 553.9 315 86.7
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 8.0e-156 553.9 317 86.1
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 8.0e-156 553.9 316 87.0
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.3e-155 552.4 315 87.0
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 5.2e-155 551.2 315 87.9
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 8.8e-155 550.4 315 86.3
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 1.5e-154 549.7 316 86.4
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 3.3e-154 548.5 315 85.4
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 7.5e-154 547.4 316 86.4
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 1.3e-153 546.6 315 86.3
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 1.3e-153 546.6 317 84.9
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 1.3e-153 546.6 315 86.3
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 1.7e-153 546.2 315 86.0
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 2.2e-153 545.8 315 85.1
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 2.8e-153 545.4 315 87.3
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 4.8e-153 544.7 317 85.5
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 6.3e-153 544.3 315 87.0
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 8.2e-153 543.9 315 85.1
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.4e-152 543.1 315 84.4
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 3.1e-152 542.0 315 86.7
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 3.1e-152 542.0 315 84.8
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 3.1e-152 542.0 338 81.7
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 4.1e-152 541.6 315 84.4
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 9.1e-152 540.4 317 85.2
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 1.6e-151 539.7 315 84.1
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 2.0e-151 539.3 315 84.1
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 2.0e-151 539.3 315 85.1
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 2.7e-151 538.9 315 84.8
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 3.5e-151 538.5 315 84.4
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 4.5e-151 538.1 317 84.2
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 4.5e-151 538.1 315 83.2
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 5.9e-151 537.7 315 84.1
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 5.9e-151 537.7 315 86.0
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 7.7e-151 537.3 317 84.9
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 7.7e-151 537.3 317 83.6
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 1.3e-150 536.6 317 84.9
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 2.2e-150 535.8 315 85.4
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 2.9e-150 535.4 314 82.8
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 2.9e-150 535.4 316 84.5
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 3.8e-150 535.0 315 83.8
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 5.0e-150 534.6 315 83.5
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 5.0e-150 534.6 315 85.4
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 6.5e-150 534.3 317 84.2
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 1.9e-149 532.7 315 82.9
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 2.5e-149 532.3 318 82.4
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 3.2e-149 531.9 315 84.1
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 5.5e-149 531.2 316 84.2
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 5.5e-149 531.2 315 82.5
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 5.5e-149 531.2 315 83.8
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 7.2e-149 530.8 315 82.9
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.6e-148 529.6 311 86.5
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 1.6e-148 529.6 317 83.6
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.7e-148 528.1 315 83.8
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 8.0e-148 527.3 317 82.6
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 1.4e-147 526.6 315 81.9
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 3.0e-147 525.4 324 82.1
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 6.8e-147 524.2 315 83.2
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 8.8e-147 523.9 341 78.9
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 3.4e-146 521.9 314 82.2
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 3.4e-146 521.9 382 72.0
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 3.7e-145 518.5 315 81.9
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 6.3e-145 517.7 306 83.7
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 8.3e-145 517.3 315 83.5
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 2.4e-144 515.8 315 81.6
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 4.1e-144 515.0 315 83.2
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 9.1e-144 513.8 317 82.6
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 1.6e-143 513.1 311 82.6
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 2.0e-143 512.7 315 82.5
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 3.5e-143 511.9 317 82.3
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.5e-143 511.9 317 82.3
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.0e-142 510.4 317 81.7
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.0e-142 510.4 317 82.0
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.0e-142 510.4 317 82.0
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.0e-142 510.4 317 82.0
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 1.3e-142 510.0 316 81.0
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 1.3e-142 510.0 315 81.0
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 8.5e-142 507.3 315 81.0
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 7.2e-141 504.2 312 80.8
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 5.2e-139 498.0 311 81.4
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 5.2e-139 498.0 322 78.0
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 8.8e-139 497.3 315 80.6
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 9.8e-138 493.8 287 84.3
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 1.3e-137 493.4 294 81.3
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 3.7e-137 491.9 315 79.4
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 8.3e-137 490.7 315 79.0
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 4.1e-136 488.4 285 85.6
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.5e-135 485.3 313 78.6
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 1.0e-134 483.8 321 74.5
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 2.3e-134 482.6 317 78.2
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 8.6e-134 480.7 290 82.4
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 8.6e-134 480.7 314 77.4
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 8.6e-134 480.7 328 75.6
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 2.5e-133 479.2 314 77.1
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 3.3e-133 478.8 465 58.3
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 2.8e-132 475.7 284 83.5
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 6.4e-129 464.5 312 74.4
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 7.8e-127 457.6 314 72.6
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.5e-125 453.4 319 71.8
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 1.2e-122 443.7 314 67.5
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 1.9e-117 426.4 286 75.2
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 6.2e-116 421.4 261 80.5
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.1e-115 420.6 242 87.2
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 8.9e-115 417.5 316 67.7
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 5.4e-96 355.1 215 81.4
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 9.0e-83 311.2 252 61.5
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 2.1e-79 300.1 173 86.7
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.8e-78 297.0 179 82.1
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 1.1e-75 287.7 315 49.8
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 2.9e-73 279.6 194 74.7
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 7.1e-72 275.0 316 47.8
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 1.3e-70 270.8 272 53.7
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 6.9e-67 258.5 164 77.4
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.0e-66 256.9 153 84.3
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.0e-66 256.9 153 84.3
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 3.2e-64 249.6 191 64.9
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 5.0e-57 225.7 186 67.7
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 6.5e-57 225.3 302 41.4
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 1.9e-56 223.8 280 48.6
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 4.6e-55 219.2 112 92.9
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 3.0e-54 216.5 310 40.6
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 3.3e-53 213.0 186 61.3
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 6.7e-46 188.7 152 68.4
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 5.7e-45 185.7 304 42.8
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 7.4e-45 185.3 113 77.0
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 2.2e-44 183.7 137 67.9
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 2.8e-44 183.3 113 76.1
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 2.8e-44 183.3 113 76.1
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 4.8e-44 182.6 144 68.8
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.4e-43 181.0 100 85.0
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 1.2e-42 177.9 132 67.4
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.1e-40 171.4 181 56.4
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 2.8e-36 156.8 171 54.4
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-34 151.4 279 34.4
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 4.5e-34 149.4 118 71.2
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 7.2e-32 142.1 108 66.7
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 7.5e-29 132.1 115 62.6
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 1.3e-25 121.3 80 77.5
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 1.3e-25 121.3 80 77.5
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 2.9e-25 120.2 68 80.9
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 2.5e-24 117.1 60 88.3
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 1.4e-22 111.3 72 66.7
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 5.4e-19 99.4 117 44.4
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 9.2e-19 98.6 53 84.9
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 1.2e-18 98.2 53 86.8
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.9e-16 90.9 91 62.6
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 7.3e-16 89.0 62 71.0
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 1.6e-15 87.8 49 85.7
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 1.4e-14 84.7 103 50.5
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 5.0e-09 66.2 44 70.5
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 1.2e-07 61.6 37 70.3
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 3.6e-07 60.1 94 40.4
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 3.6e-07 60.1 94 40.4
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 3.6e-07 60.1 94 40.4
Zm00001eb363380 Zea mays HOM05D003935 ORTHO05D445556 1.1e-06 58.5 37 67.6
BcaNung06191 Brassica carinata HOM05D042458 ORTHO05D090953 6.8e-06 55.8 29 93.1


User provided reference genes

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