Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 2.8e-126 455.3 234 100.0
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.4e-125 453.0 234 99.6
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.7e-86 323.2 234 71.8
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 4.9e-86 321.6 236 71.2
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 5.1e-83 311.6 229 72.1
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.1e-82 310.5 235 69.8
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 1.9e-82 309.7 235 69.4
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 2.5e-82 309.3 233 70.8
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 1.6e-81 306.6 235 70.6
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 3.6e-81 305.4 242 67.8
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 8.1e-81 304.3 235 67.7
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.8e-80 303.1 236 71.2
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.3e-80 301.6 231 69.7
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 9.0e-80 300.8 234 66.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.2e-79 300.4 221 68.8
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 1.5e-79 300.1 236 65.7
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 2.6e-79 299.3 236 66.1
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 3.4e-79 298.9 242 65.7
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 4.5e-79 298.5 234 66.2
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 1.3e-78 297.0 230 67.4
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 1.3e-78 297.0 230 67.4
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.7e-78 296.6 235 66.4
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.7e-78 296.6 239 66.9
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.7e-78 296.6 230 66.5
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 3.8e-78 295.4 234 65.4
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-78 295.4 232 65.9
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-78 295.4 233 65.2
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 8.4e-78 294.3 231 66.7
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 8.4e-78 294.3 240 65.4
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.1e-77 293.9 230 67.0
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.1e-77 293.9 230 67.0
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.1e-77 293.9 232 66.4
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.1e-77 293.9 236 64.4
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.4e-77 293.5 232 65.5
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 1.4e-77 293.5 237 66.2
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.9e-77 293.1 233 66.5
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.9e-77 293.1 235 67.7
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 3.2e-77 292.4 231 66.7
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 4.2e-77 292.0 237 68.4
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 5.4e-77 291.6 232 65.5
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 9.3e-77 290.8 233 67.0
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 9.3e-77 290.8 239 63.6
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.2e-76 290.4 240 62.9
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.6e-76 290.0 233 67.0
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 2.1e-76 289.7 227 68.3
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 2.7e-76 289.3 241 66.0
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 6.0e-76 288.1 248 62.1
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 7.9e-76 287.7 226 62.8
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 1.3e-75 287.0 234 65.0
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.3e-75 287.0 236 66.9
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 3.0e-75 285.8 236 65.7
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 3.0e-75 285.8 231 66.2
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 3.9e-75 285.4 234 66.7
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.1e-74 283.9 233 64.8
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 1.1e-74 283.9 234 64.1
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.9e-74 283.1 231 67.1
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 3.3e-74 282.3 231 66.2
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.3e-74 282.0 233 63.1
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.1e-73 279.6 233 62.7
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 4.8e-73 278.5 260 59.2
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 6.2e-73 278.1 235 63.0
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 8.1e-73 277.7 240 63.3
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 8.1e-73 277.7 236 61.4
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.8e-72 276.6 201 71.1
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 3.1e-72 275.8 234 62.8
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.0e-71 273.1 229 63.3
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 4.5e-71 271.9 186 72.0
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.7e-70 270.0 228 61.4
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 3.8e-70 268.9 230 62.2
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.4e-70 268.1 228 63.2
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.4e-69 266.2 234 63.7
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.2e-68 263.8 180 73.9
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 2.1e-68 263.1 239 60.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 2.1e-68 263.1 237 61.6
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.3e-67 259.6 240 61.2
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 3.0e-67 259.2 241 59.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 3.0e-67 259.2 237 60.8
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 5.1e-67 258.5 239 60.7
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.5e-66 256.9 223 62.3
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 4.3e-66 255.4 241 58.5
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 9.6e-66 254.2 240 60.0
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 1.8e-64 250.0 234 56.8
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.5e-63 246.9 227 59.9
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 2.9e-62 242.7 230 59.6
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 4.6e-60 235.3 241 58.1
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.0e-60 235.0 224 56.2
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.0e-59 234.2 159 73.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.1e-58 230.7 234 54.3
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.0e-55 219.9 222 55.0
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 3.4e-55 219.2 233 54.1
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 7.6e-55 218.0 162 66.7
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.7e-54 216.9 197 58.4
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 1.4e-53 213.8 233 55.8
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 4.2e-53 212.2 142 71.8
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 6.1e-52 208.4 146 72.6
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.8e-51 206.8 139 73.4
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.8e-48 196.8 139 70.5
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 4.6e-44 182.2 137 67.9
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 3.3e-42 176.0 95 81.1
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 9.7e-42 174.5 125 71.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.8e-40 170.2 226 47.3
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 5.5e-37 158.7 191 43.5
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 3.6e-36 156.0 188 41.5
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 3.9e-35 152.5 252 39.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 5.7e-34 148.7 229 44.5
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.3e-33 147.5 157 45.9
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 3.7e-33 146.0 168 42.9
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.8e-32 143.7 140 58.6
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 2.2e-30 136.7 139 55.4
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 4.1e-24 115.9 166 35.5
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 5.3e-24 115.5 228 36.8
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 5.0e-22 109.0 91 65.9
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 6.3e-17 92.0 92 56.5
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 2.4e-16 90.1 57 71.9
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.0e-11 74.7 152 28.3
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.3e-11 73.6 138 25.4
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 5.9e-07 58.9 157 33.1


User provided reference genes

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