Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 2.1e-169 599.0 309 100.0
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 5.5e-162 574.3 312 96.5
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 7.3e-29 132.1 338 35.2
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 6.6e-22 109.0 331 33.8
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 5.6e-21 105.9 324 31.8
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.9e-17 93.6 170 38.2
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.9e-17 93.6 170 38.2
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 2.4e-16 90.5 159 38.4
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 7.1e-16 89.0 160 38.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 3.5e-15 86.7 160 38.1
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 3.9e-14 83.2 165 38.8
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 8.6e-14 82.0 164 37.8
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 8.6e-14 82.0 180 37.2
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 8.6e-14 82.0 156 35.9
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.3e-13 80.1 171 36.3
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 4.3e-13 79.7 161 36.6
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 5.6e-13 79.3 146 41.1
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 7.3e-13 79.0 146 40.4
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 7.3e-13 79.0 177 35.6
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 9.6e-13 78.6 168 35.7
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.2e-12 78.2 166 36.7
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.6e-12 77.8 166 33.1
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.6e-12 77.8 145 38.6
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.1e-12 77.4 173 38.2
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 2.1e-12 77.4 169 35.5
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 3.6e-12 76.6 168 35.1
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 6.2e-12 75.9 162 37.7
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.1e-11 75.1 146 39.7
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 1.1e-11 75.1 167 35.3
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 1.4e-11 74.7 133 38.3
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 5.2e-11 72.8 170 35.3
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 5.2e-11 72.8 149 38.3
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 6.9e-11 72.4 161 34.2
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.5e-10 71.2 160 35.6
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 2.6e-10 70.5 168 33.9
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.6e-10 70.5 165 33.9
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 4.4e-10 69.7 146 34.9
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 5.8e-10 69.3 148 36.5
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 7.6e-10 68.9 123 40.7
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 9.9e-10 68.6 151 35.8
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 9.9e-10 68.6 156 35.9
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.9e-09 67.0 165 35.8
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 2.9e-09 67.0 151 35.8
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 3.8e-09 66.6 141 40.4
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.8e-09 66.6 160 31.9
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.4e-08 64.7 148 36.5
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 1.9e-08 64.3 162 31.5
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 2.4e-08 63.9 185 34.6
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 2.4e-08 63.9 160 32.5
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 5.4e-08 62.8 166 34.3
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 7.1e-08 62.4 159 34.0
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 7.1e-08 62.4 171 30.4
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.6e-07 61.2 118 39.8
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 4.6e-07 59.7 144 31.9
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 4.6e-07 59.7 140 32.9
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 6.0e-07 59.3 167 32.9
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 7.8e-07 58.9 173 31.8
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 5.1e-06 56.2 78 41.0
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 5.1e-06 56.2 194 29.9
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 6.6e-06 55.8 143 34.3


User provided reference genes

Program Settings