Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0681 Papaver somniferum HOM05D004688 ORTHO05D005490 2.3e-193 678.7 344 100.0
PSO063G1904 Papaver somniferum HOM05D004688 ORTHO05D005490 1.8e-190 669.1 344 98.8
Aqoxy1G03166 Aquilegia oxysepala HOM05D004688 ORTHO05D005490 1.8e-132 476.5 345 72.8
TAR629G2324 Trochodendron aralioides HOM05D004688 ORTHO05D005490 3.9e-132 475.3 345 71.9
TAR636G2823 Trochodendron aralioides HOM05D004688 ORTHO05D005490 5.1e-132 474.9 345 72.5
Cfa016079 Carpinus fangiana HOM05D004688 ORTHO05D005490 7.9e-125 451.1 345 67.8
QL09p020531 Quercus lobata HOM05D004688 ORTHO05D005490 3.3e-123 445.7 350 66.6
Haze_00366 Corylus avellana HOM05D004688 ORTHO05D005490 1.4e-121 440.3 345 66.7
CiPaw.05G212300 Carya illinoinensis HOM05D004688 ORTHO05D005490 1.5e-120 436.8 345 66.4
Potri.019G042700 Populus trichocarpa HOM05D004688 ORTHO05D005490 5.8e-120 434.9 345 66.4
RhsimUnG0132900 Rhododendron simsii HOM05D004688 ORTHO05D005490 1.0e-119 434.1 345 66.1
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla HOM05D004688 ORTHO05D005490 5.0e-119 431.8 345 65.5
vmacro12865 Vaccinium macrocarpon HOM05D004688 ORTHO05D005490 1.4e-118 430.3 348 64.7
Manes.08G160300 Manihot esculenta HOM05D004688 ORTHO05D005490 1.0e-116 424.1 345 64.3
Thecc.05G223200 Theobroma cacao HOM05D004688 ORTHO05D005490 1.3e-116 423.7 344 65.7
FAN01G2619 Fragaria x ananassa HOM05D004688 ORTHO05D005490 2.3e-116 422.9 347 64.8
COL.COLO4_15125 Corchorus olitorius HOM05D004688 ORTHO05D005490 5.1e-116 421.8 345 64.6
FAN03G0573 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.5e-115 420.2 347 64.6
FvH4_7g34310 Fragaria vesca HOM05D004688 ORTHO05D005490 1.9e-115 419.9 347 64.6
Atru.chr12.1856 Acer truncatum HOM05D004688 ORTHO05D005490 5.7e-115 418.3 349 62.8
Ciclev10032005m.g Citrus clementina HOM05D004688 ORTHO05D005490 7.4e-115 417.9 346 64.2
Manes.09G130000 Manihot esculenta HOM05D004688 ORTHO05D005490 7.4e-115 417.9 345 64.3
Dinv24334 Davidia involucrata HOM05D004688 ORTHO05D005490 2.8e-114 416.0 348 64.1
Actinidia20087 Actinidia chinensis HOM05D004688 ORTHO05D005490 1.8e-113 413.3 345 64.1
Potri.013G076900 Populus trichocarpa HOM05D004688 ORTHO05D005490 2.4e-113 412.9 345 64.6
Nn1g09153 Nelumbo nucifera HOM05D004688 ORTHO05D005490 3.1e-113 412.5 351 65.5
RcHm_v2.0_Chr1g0384701 Rosa chinensis HOM05D004688 ORTHO05D005490 4.1e-113 412.1 348 64.1
Duzib177G0832 Durio zibethinus HOM05D004688 ORTHO05D005490 5.3e-113 411.8 350 63.7
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.7e-111 406.8 346 64.5
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea HOM05D004688 ORTHO05D005490 2.2e-111 406.4 346 64.5
Duzib128G0049 Durio zibethinus HOM05D004688 ORTHO05D005490 2.2e-111 406.4 356 61.2
Cc04_g10300 Coffea canephora HOM05D004688 ORTHO05D005490 3.8e-111 405.6 347 62.8
GSVIVG01024321001 Vitis vinifera HOM05D004688 ORTHO05D005490 5.0e-111 405.2 345 62.0
Gohir.D13G162400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.1e-110 404.1 345 62.9
Prupe.2G329400 Prunus persica HOM05D004688 ORTHO05D005490 2.5e-110 402.9 347 63.1
MBI04_g30768_MAGBIO Magnolia biondii HOM05D004688 ORTHO05D005490 3.2e-110 402.5 356 61.0
Gorai.013G184500 Gossypium raimondii HOM05D004688 ORTHO05D005490 5.5e-110 401.7 349 62.8
Gohir.A13G158100 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.2e-109 400.6 336 64.0
Nn3g21937 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.2e-109 400.6 348 62.6
Nn4g25357 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.4e-108 397.1 346 61.3
CiPaw.06G036300 Carya illinoinensis HOM05D004688 ORTHO05D005490 3.0e-108 396.0 345 62.0
Gorai.003G058400 Gossypium raimondii HOM05D004688 ORTHO05D005490 1.5e-107 393.7 345 62.3
Lj3g0005411 Lotus japonicus HOM05D004688 ORTHO05D005490 3.3e-107 392.5 344 62.8
Oeu037809.1 Olea europaea HOM05D004688 ORTHO05D005490 3.3e-107 392.5 345 62.3
SalBow1G7515 Salvia bowleyana HOM05D004688 ORTHO05D005490 4.3e-107 392.1 345 63.8
Gohir.A02G114600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 7.4e-107 391.3 345 61.7
Oeu047689.1 Olea europaea HOM05D004688 ORTHO05D005490 7.4e-107 391.3 345 62.3
Gohir.D03G055600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.3e-106 390.6 345 62.0
ClCG09G013160 Citrullus lanatus HOM05D004688 ORTHO05D005490 1.7e-106 390.2 347 61.1
Sabra19G0053300 Salix brachista HOM05D004688 ORTHO05D005490 1.1e-105 387.5 414 53.1
Solyc11g005810.2 Solanum lycopersicum HOM05D004688 ORTHO05D005490 2.4e-105 386.3 345 62.0
Eucgr.E02431 Eucalyptus grandis HOM05D004688 ORTHO05D005490 4.1e-105 385.6 345 61.7
Sopen11g001770 Solanum pennellii HOM05D004688 ORTHO05D005490 4.1e-105 385.6 345 62.0
MD07G1032800 Malus domestica HOM05D004688 ORTHO05D005490 5.3e-105 385.2 347 61.7
Sabra13G0065900 Salix brachista HOM05D004688 ORTHO05D005490 6.9e-105 384.8 409 53.5
DCAR_030965 Daucus carota HOM05D004688 ORTHO05D005490 9.1e-105 384.4 343 61.2
Lj2A605T63 Lonicera japonica HOM05D004688 ORTHO05D005490 9.1e-105 384.4 394 56.3
Sed0002645 Sechium edule HOM05D004688 ORTHO05D005490 1.2e-104 384.0 346 60.1
CANSAT21G2449 Cannabis sativa HOM05D004688 ORTHO05D005490 1.5e-104 383.6 349 60.2
CsaV3_6G036850 Cucumis sativus L. HOM05D004688 ORTHO05D005490 1.5e-104 383.6 346 59.5
MELO3C014341.2 Cucumis melo HOM05D004688 ORTHO05D005490 2.0e-104 383.3 347 60.5
Ca_19600_v3 Cicer arietinum L. HOM05D004688 ORTHO05D005490 2.6e-104 382.9 345 62.3
PGSC0003DMG400028677 Solanum tuberosum HOM05D004688 ORTHO05D005490 2.6e-104 382.9 345 61.2
Gohir.A08G221644 Gossypium hirsutum HOM05D004688 ORTHO05D005490 5.9e-104 381.7 345 61.2
FAN10G2489 Fragaria x ananassa HOM05D004688 ORTHO05D005490 5.0e-103 378.6 389 56.3
Glyma.12G014100 Glycine max HOM05D004688 ORTHO05D005490 1.1e-102 377.5 354 60.5
TWI12G0369 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 1.9e-102 376.7 356 58.4
Gohir.D08G240400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.5e-102 376.3 345 60.6
Glyma.09G222900 Glycine max HOM05D004688 ORTHO05D005490 3.2e-102 375.9 355 60.8
Peaxi162Scf00012g01425 Petunia axillaris HOM05D004688 ORTHO05D005490 5.5e-102 375.2 346 61.8
Sed0013330 Sechium edule HOM05D004688 ORTHO05D005490 5.5e-102 375.2 346 60.4
TWI18G0476 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 5.5e-102 375.2 345 59.7
Oeu044132.1 Olea europaea HOM05D004688 ORTHO05D005490 7.2e-102 374.8 346 60.1
MSTRG.14034 Avicennia marina HOM05D004688 ORTHO05D005490 1.2e-101 374.0 345 61.4
CDE11G1120 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 1.2e-101 374.0 349 57.3
TPR.G9830 Trifolium pratense HOM05D004688 ORTHO05D005490 1.2e-101 374.0 349 60.2
CDE02G1754 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 2.1e-101 373.2 339 58.4
HanXRQChr04g0116531 Helianthus annuus HOM05D004688 ORTHO05D005490 4.7e-101 372.1 345 60.9
Gorai.004G255700 Gossypium raimondii HOM05D004688 ORTHO05D005490 6.1e-101 371.7 345 60.0
MSTRG.1666 Avicennia marina HOM05D004688 ORTHO05D005490 7.9e-101 371.3 345 61.2
Migut.E01543 Erythranthe guttata HOM05D004688 ORTHO05D005490 2.3e-100 369.8 347 60.5
ECA236G0885 Erigeron canadensis HOM05D004688 ORTHO05D005490 3.0e-100 369.4 345 60.9
VMungo1127G1418 Vigna mungo HOM05D004688 ORTHO05D005490 3.0e-100 369.4 350 58.3
MD01G1239500 Malus domestica HOM05D004688 ORTHO05D005490 8.8e-100 367.9 347 59.9
CSS0020442 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 3.3e-99 365.9 358 60.6
Psat0s643g0040 Pisum sativum HOM05D004688 ORTHO05D005490 7.4e-99 364.8 347 59.7
SGA_v2.0_scaffold163G38052 Striga asiatica HOM05D004688 ORTHO05D005490 1.4e-97 360.5 349 60.5
Lalb_Chr19g0140091 Lupinus albus HOM05D004688 ORTHO05D005490 2.6e-96 356.3 335 59.4
Dinv03730 Davidia involucrata HOM05D004688 ORTHO05D005490 3.5e-96 355.9 297 64.3
THA.LOC104805719 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 3.8e-95 352.4 347 58.8
Medtr0004s0230 Medicago truncatula HOM05D004688 ORTHO05D005490 1.1e-94 350.9 352 57.7
THA.LOC104823796 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 1.9e-94 350.1 349 57.9
Carub.0007s1324 Capsella rubella HOM05D004688 ORTHO05D005490 9.4e-94 347.8 348 58.9
Sp7g25560 Schrenkiella parvula HOM05D004688 ORTHO05D005490 1.6e-93 347.1 347 57.6
Sc07g0001340 Simmondsia chinensis HOM05D004688 ORTHO05D005490 4.7e-93 345.5 343 55.1
Aa31LG5G12060 Aethionema arabicum HOM05D004688 ORTHO05D003121 1.4e-92 344.0 344 56.7
Lalb_Chr01g0000741 Lupinus albus HOM05D004688 ORTHO05D005490 1.4e-92 344.0 350 56.6
AUR62002842 Chenopodium quinoa HOM05D004688 ORTHO05D005490 2.3e-92 343.2 352 55.1
THA.LOC104821693 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 6.7e-92 341.7 348 56.9
CARHR235310 Cardamine hirsuta HOM05D004688 ORTHO05D005490 2.6e-91 339.7 351 56.7
Sp7g25570 Schrenkiella parvula HOM05D004688 ORTHO05D005490 7.5e-91 338.2 346 56.4
Os02g0582200 Oryza sativa ssp. japonica HOM05D004688 ORTHO05D005490 9.7e-91 337.8 352 54.5
Thhalv10025651m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.7e-90 337.0 346 56.6
EL10Ac6g14347 Beta vulgaris HOM05D004688 ORTHO05D005490 2.2e-90 336.7 345 55.7
Thhalv10025690m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 6.3e-90 335.1 346 55.5
Lalb_Chr03g0024311 Lupinus albus HOM05D004688 ORTHO05D005490 6.3e-90 335.1 323 59.8
HanXRQChr15g0482031 Helianthus annuus HOM05D004688 ORTHO05D005490 5.3e-89 332.0 348 56.6
AL7G25110 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 9.1e-89 331.3 351 55.6
AT4G27610 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 1.6e-88 330.5 346 56.6
BcaNung01654 Brassica carinata HOM05D004688 ORTHO05D005490 2.7e-88 329.7 348 55.7
PGR142G2085 Punica granatum HOM05D004688 ORTHO05D005490 2.7e-88 329.7 347 57.1
Carub.0007s1323 Capsella rubella HOM05D004688 ORTHO05D005490 3.5e-88 329.3 347 56.8
CARHR235320 Cardamine hirsuta HOM05D004688 ORTHO05D005490 2.2e-87 326.6 347 56.2
Zm00001eb245400 Zea mays HOM05D004688 ORTHO05D005490 5.0e-87 325.5 352 53.7
AT4G27620 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 5.5e-86 322.0 347 55.6
AUR62037307 Chenopodium quinoa HOM05D004688 ORTHO05D005490 9.4e-86 321.2 344 53.8
Nitab4.5_0000877g0060 Nicotiana tabacum HOM05D004688 ORTHO05D005490 9.4e-86 321.2 350 55.7
Zm00001eb183340 Zea mays HOM05D004688 ORTHO05D005490 1.2e-85 320.9 352 52.6
Ah.03g138260 Amaranthus hybridus HOM05D004688 ORTHO05D005490 1.6e-85 320.5 344 52.6
Duzib106G1350 Durio zibethinus HOM05D004688 ORTHO05D005490 2.1e-85 320.1 283 60.4
Phvul.011G017000 Phaseolus vulgaris HOM05D004688 ORTHO05D005490 1.3e-82 310.8 280 62.5
A01p18910 Brassica napus HOM05D004688 ORTHO05D005490 2.2e-82 310.1 347 55.3
BraA01t01832Z Brassica rapa HOM05D004688 ORTHO05D005490 2.8e-82 309.7 347 55.3
BcaNung01652 Brassica carinata HOM05D004688 ORTHO05D005490 3.1e-81 306.2 347 53.9
CSS0035319 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 3.1e-81 306.2 256 65.2
BcaC09g50567 Brassica carinata HOM05D004688 ORTHO05D005490 7.0e-81 305.1 347 53.3
BolC1t02331H Brassica oleracea HOM05D004688 ORTHO05D005490 7.0e-81 305.1 347 53.3
Ah.02g127670 Amaranthus hybridus HOM05D004688 ORTHO05D005490 1.2e-80 304.3 349 51.3
C01p23860 Brassica napus HOM05D004688 ORTHO05D005490 1.6e-80 303.9 347 53.6
A03p57380 Brassica napus HOM05D004688 ORTHO05D005490 4.5e-80 302.4 326 54.6
BraA03t14804Z Brassica rapa HOM05D004688 ORTHO05D005490 4.5e-80 302.4 326 54.6
A01p18850 Brassica napus HOM05D004688 ORTHO05D005490 7.7e-80 301.6 350 52.6
BraA01t01828Z Brassica rapa HOM05D004688 ORTHO05D005490 2.2e-79 300.1 350 52.3
BcaC09g50575 Brassica carinata HOM05D004688 ORTHO05D005490 2.9e-79 299.7 351 52.4
BolC1t02329H Brassica oleracea HOM05D004688 ORTHO05D005490 3.8e-79 299.3 351 52.4
C01p23780 Brassica napus HOM05D004688 ORTHO05D005490 6.5e-79 298.5 349 52.7
BolC7t46040H Brassica oleracea HOM05D004688 ORTHO05D005490 8.5e-79 298.1 329 55.3
C07p55600 Brassica napus HOM05D004688 ORTHO05D005490 1.5e-78 297.4 329 54.7
BcaC06g32678 Brassica carinata HOM05D004688 ORTHO05D005490 4.7e-77 292.4 350 52.0
Actinidia06638 Actinidia chinensis HOM05D004688 ORTHO05D005490 6.8e-76 288.5 244 64.3
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 9.2e-73 278.1 285 57.9
Migut.A00176 Erythranthe guttata HOM05D004688 ORTHO05D005490 4.6e-64 249.2 344 49.4
AL7G25100 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 4.3e-62 242.7 209 65.1
ATR0829G074 Amborella trichopoda HOM05D004688 ORTHO05D005490 1.2e-61 241.1 341 46.0
unitig_578.g16583 Utricularia gibba HOM05D004688 ORTHO05D005490 1.4e-60 237.7 266 53.8
Nitab4.5_0000805g0040 Nicotiana tabacum HOM05D004688 ORTHO05D005490 9.5e-46 188.3 348 38.2
SEGI_37617 Sequoiadendron giganteum HOM05D004688 ORTHO05D005490 5.4e-41 172.6 390 35.1
BcaC06g32679 Brassica carinata HOM05D006163 ORTHO05D007625 4.7e-37 159.5 324 38.9
HPP92_022761 Vanilla planifolia HOM05D004688 ORTHO05D005490 5.1e-31 139.4 255 39.2
HPP92_004940 Vanilla planifolia HOM05D004688 ORTHO05D005490 1.9e-25 120.9 160 47.5
unitig_8.g5064 Utricularia gibba HOM05D004688 ORTHO05D005490 7.1e-25 119.0 155 47.7
Oeu004249.1 Olea europaea HOM05D004688 ORTHO05D005490 7.6e-19 99.0 231 32.9
HPP92_004939 Vanilla planifolia HOM05D004688 ORTHO05D005490 1.7e-18 97.8 165 39.4
SGA_v2.0_scaffold249G44960 Striga asiatica HOM05D004688 ORTHO05D005490 6.0e-16 89.4 105 52.4
unitig_8.g5063 Utricularia gibba HOM05D004688 ORTHO05D005490 1.9e-14 84.3 151 37.1
Peaxi162Scf00120g01119 Petunia axillaris HOM05D002883 ORTHO05D003116 4.9e-10 69.7 181 33.7
Mapoly0010s0074 Marchantia polymorpha HOM05D017133 ORTHO05D005490 2.7e-08 63.9 248 26.2
SMO367G0918 Selaginella moellendorffii HOM05D004688 ORTHO05D005490 1.3e-07 61.6 194 29.9
Pp3c18_2430 Physcomitrium patens HOM05D017133 ORTHO05D019609 3.3e-06 57.0 252 23.8


User provided reference genes

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