Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 3.6e-261 904.4 472 100.0
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 2.1e-237 825.5 445 96.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 1.0e-138 497.7 477 57.0
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 2.5e-137 493.0 463 57.2
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.0e-135 487.6 472 55.5
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 1.4e-135 487.3 478 56.1
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 7.5e-134 481.5 462 55.6
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 7.5e-134 481.5 474 55.1
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 4.1e-132 475.7 475 55.8
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 2.7e-131 473.0 468 56.4
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 3.5e-131 472.6 468 53.4
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 5.0e-130 468.8 475 55.6
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 5.0e-130 468.8 468 55.1
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 1.9e-129 466.8 465 54.2
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 7.2e-129 464.9 465 54.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.0e-127 461.1 480 54.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 2.3e-127 459.9 467 53.1
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.0e-127 459.1 465 54.4
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 5.2e-127 458.8 480 54.2
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 5.2e-127 458.8 475 53.5
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 2.6e-126 456.4 469 53.9
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 5.7e-126 455.3 463 54.2
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 2.2e-125 453.4 468 52.6
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 2.2e-125 453.4 466 52.6
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 6.3e-125 451.8 462 53.5
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 5.4e-124 448.7 463 54.9
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 9.2e-124 448.0 466 52.4
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 4.5e-123 445.7 465 53.5
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 4.5e-123 445.7 465 53.5
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 4.5e-123 445.7 465 53.5
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 4.5e-123 445.7 472 50.8
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 5.9e-123 445.3 468 51.7
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.0e-122 444.5 473 51.6
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.7e-122 443.7 466 51.5
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.9e-122 443.0 463 52.5
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 5.0e-122 442.2 482 50.6
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 9.5e-121 438.0 472 50.6
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 2.8e-120 436.4 360 64.7
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 6.1e-120 435.3 465 52.5
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 2.3e-119 433.3 465 52.5
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.0e-119 433.0 485 51.1
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 3.0e-119 433.0 472 52.5
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.0e-118 430.3 476 51.1
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.4e-118 429.5 473 51.6
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.8e-118 428.7 473 50.1
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.9e-117 426.4 476 50.2
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 2.9e-117 426.4 471 50.3
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 6.4e-117 425.2 475 50.7
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.4e-116 424.1 477 50.7
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.4e-116 423.3 476 52.5
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 7.0e-116 421.8 476 49.4
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 9.2e-116 421.4 471 50.3
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 9.2e-116 421.4 476 49.2
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.2e-115 421.0 463 51.0
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 3.5e-115 419.5 471 48.6
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 7.8e-115 418.3 473 51.4
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 1.0e-114 417.9 470 51.9
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.9e-113 413.7 473 49.3
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 5.6e-113 412.1 476 49.2
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.1e-112 410.2 471 48.8
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 4.7e-112 409.1 470 51.3
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.4e-111 407.5 478 50.2
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 5.2e-111 405.6 475 49.5
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.2e-110 404.4 470 50.6
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 2.6e-110 403.3 474 47.9
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 2.6e-110 403.3 471 50.1
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 5.8e-110 402.1 472 49.8
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 9.8e-110 401.4 412 54.6
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.3e-109 401.0 456 48.2
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 2.2e-109 400.2 476 46.6
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 8.3e-109 398.3 441 51.0
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 4.1e-108 396.0 475 49.5
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 2.7e-107 393.3 461 51.2
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 1.6e-104 384.0 422 50.9
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 5.2e-103 379.0 467 45.6
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 5.8e-102 375.6 416 51.4
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.3e-101 374.4 416 50.5
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.7e-101 374.0 467 47.5
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 4.9e-101 372.5 424 49.1
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 9.2e-100 368.2 415 50.8
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 7.8e-99 365.2 603 38.6
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 7.3e-97 358.6 420 49.5
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.4e-95 353.6 364 52.5
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.3e-93 347.8 407 49.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 3.8e-93 346.3 407 49.6
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 8.4e-93 345.1 461 46.9
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.6e-83 312.8 351 51.0
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 4.5e-78 296.2 462 42.0
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 3.2e-76 290.0 472 41.1
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 5.8e-70 269.2 235 60.4
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 8.4e-69 265.4 529 34.8
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 7.9e-67 258.8 234 56.8
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 2.3e-66 257.3 334 44.9
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 2.5e-65 253.8 259 54.4
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.6e-59 234.6 262 48.1
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 9.7e-57 225.3 453 37.1
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 3.9e-50 203.4 149 69.1
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.3e-45 188.3 426 29.8
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 5.5e-44 183.0 542 26.2
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 2.5e-36 157.5 302 35.4
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 5.2e-34 149.8 465 29.5
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 6.7e-34 149.4 452 29.4
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.4e-31 141.7 115 62.6
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 5.0e-29 133.3 228 41.2
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-26 125.6 184 41.8
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 5.2e-26 123.2 452 27.4
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 2.7e-22 110.9 228 36.0
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 2.2e-21 107.8 120 54.2
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 1.0e-18 99.0 145 41.4
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 2.3e-18 97.8 178 39.9
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 1.5e-17 95.1 110 50.9
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 1.7e-16 91.7 152 38.8
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.7e-13 81.6 96 47.9
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 5.5e-12 76.6 124 37.9
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 3.0e-10 70.9 485 20.8
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 3.7e-08 63.9 121 28.9


User provided reference genes

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