Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 1.6e-83 312.8 160 100.0
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 1.3e-24 117.1 109 58.7
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 1.1e-23 114.0 101 62.4
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 2.4e-23 112.8 88 68.2
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 4.0e-23 112.1 88 65.9
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 4.0e-23 112.1 88 65.9
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 5.3e-23 111.7 82 67.1
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 5.3e-23 111.7 110 58.2
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 9.0e-23 110.9 124 50.8
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 1.2e-22 110.5 107 58.9
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.5e-22 110.2 113 54.0
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.5e-22 110.2 82 68.3
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 1.5e-22 110.2 88 67.0
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 1.5e-22 110.2 88 67.0
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 2.0e-22 109.8 79 72.2
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 2.6e-22 109.4 125 52.8
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 3.4e-22 109.0 107 56.1
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 4.5e-22 108.6 86 69.8
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 4.5e-22 108.6 88 63.6
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 5.8e-22 108.2 84 63.1
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 7.6e-22 107.8 86 67.4
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 9.9e-22 107.5 80 67.5
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 9.9e-22 107.5 86 66.3
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 1.3e-21 107.1 85 67.1
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 1.7e-21 106.7 88 59.1
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 2.2e-21 106.3 88 67.0
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 2.2e-21 106.3 87 62.1
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 2.9e-21 105.9 86 65.1
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 2.9e-21 105.9 91 59.3
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 3.8e-21 105.5 130 48.5
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 4.9e-21 105.1 90 57.8
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 8.4e-21 104.4 88 64.8
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 8.4e-21 104.4 83 65.1
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.4e-20 103.6 80 67.5
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.4e-20 103.6 80 67.5
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.4e-20 103.6 80 67.5
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.4e-20 103.6 80 67.5
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.4e-20 103.6 86 66.3
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 1.4e-20 103.6 111 55.0
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.9e-20 103.2 91 60.4
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 1.9e-20 103.2 88 56.8
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 1.9e-20 103.2 88 56.8
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 1.9e-20 103.2 88 56.8
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.9e-20 103.2 88 62.5
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 2.5e-20 102.8 91 58.2
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 2.5e-20 102.8 88 62.5
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 2.5e-20 102.8 141 48.9
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 3.2e-20 102.4 88 56.8
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 3.2e-20 102.4 85 62.4
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 3.2e-20 102.4 88 63.6
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 5.5e-20 101.7 88 56.8
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 5.5e-20 101.7 125 44.8
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 5.5e-20 101.7 144 47.2
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 7.1e-20 101.3 144 45.8
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 1.2e-19 100.5 88 58.0
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.2e-19 100.5 100 56.0
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 1.2e-19 100.5 88 62.5
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 1.2e-19 100.5 85 63.5
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 2.1e-19 99.8 88 56.8
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 2.1e-19 99.8 88 61.4
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 2.7e-19 99.4 81 58.0
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 2.7e-19 99.4 124 44.4
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 2.7e-19 99.4 124 44.4
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 3.5e-19 99.0 57 82.5
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 3.5e-19 99.0 100 56.0
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 3.5e-19 99.0 87 60.9
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 6.0e-19 98.2 142 43.7
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 6.0e-19 98.2 94 59.6
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 7.9e-19 97.8 107 51.4
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 7.9e-19 97.8 88 61.4
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.3e-18 97.1 88 59.1
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.3e-18 97.1 100 55.0
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 1.3e-18 97.1 77 61.0
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 1.8e-18 96.7 86 60.5
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 1.8e-18 96.7 55 78.2
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 2.3e-18 96.3 77 61.0
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 2.3e-18 96.3 80 63.8
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 3.0e-18 95.9 82 62.2
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 3.0e-18 95.9 77 61.0
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 6.7e-18 94.7 79 60.8
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 6.7e-18 94.7 88 59.1
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 8.7e-18 94.4 68 64.7
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 8.7e-18 94.4 72 63.9
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 8.7e-18 94.4 125 46.4
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 1.1e-17 94.0 57 73.7
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 1.1e-17 94.0 86 55.8
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 1.1e-17 94.0 63 65.1
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 1.5e-17 93.6 50 84.0
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 1.5e-17 93.6 57 73.7
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 2.5e-17 92.8 90 52.2
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 3.3e-17 92.4 86 52.3
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 4.3e-17 92.0 55 74.5
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 4.3e-17 92.0 127 45.7
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 5.6e-17 91.7 84 53.6
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 7.4e-17 91.3 55 74.5
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 7.4e-17 91.3 55 74.5
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 1.3e-16 90.5 86 51.2
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 2.8e-16 89.4 80 55.0
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 6.2e-16 88.2 52 73.1
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 1.8e-15 86.7 94 54.3
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 2.4e-15 86.3 53 69.8
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 3.1e-15 85.9 94 52.1
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 1.2e-14 84.0 51 68.6
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 4.5e-14 82.0 46 76.1
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 7.6e-14 81.3 88 48.9
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 1.3e-13 80.5 87 46.0
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 4.9e-13 78.6 51 66.7
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 2.5e-12 76.3 85 49.4
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 2.1e-11 73.2 51 62.7
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 1.0e-10 70.9 54 66.7
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.3e-10 70.5 82 43.9
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 8.7e-10 67.8 49 59.2
Lj2C204G6 Lonicera japonica HOM05D005851 ORTHO05D007137 3.3e-09 65.9 77 53.2
COL.COLO4_23837 Corchorus olitorius HOM05D005851 ORTHO05D007137 2.2e-08 63.2 91 44.0
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 2.8e-08 62.8 98 34.7
BcaC09g48268 Brassica carinata HOM05D002423 ORTHO05D007137 6.3e-08 61.6 73 49.3
C01p52310 Brassica napus HOM05D002423 ORTHO05D007137 6.3e-08 61.6 73 49.3
Aqoxy5G03942 Aquilegia oxysepala HOM05D001344 ORTHO05D002590 8.2e-08 61.2 57 59.6
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 1.8e-07 60.1 46 52.2
Cfa020517 Carpinus fangiana HOM05D005851 ORTHO05D007137 5.3e-07 58.5 64 56.2
Dinv39056 Davidia involucrata HOM05D005851 ORTHO05D007137 2.6e-06 56.2 81 50.6
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea HOM05D005851 ORTHO05D007137 7.7e-06 54.7 40 67.5


User provided reference genes

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