Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.4e-65 250.8 141 100.0
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 6.0e-63 244.2 141 97.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 6.0e-39 164.5 152 65.1
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.4e-35 152.5 110 83.6
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.5e-34 148.3 159 62.3
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.5e-34 148.3 159 62.3
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 5.9e-34 147.9 114 76.3
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.6e-34 147.5 132 71.2
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 7.6e-34 147.5 154 62.3
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.0e-33 147.1 131 71.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.0e-33 147.1 155 65.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 2.9e-33 145.6 127 71.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.8e-33 145.2 114 78.1
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.8e-33 145.2 114 79.8
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 6.5e-33 144.4 110 80.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 6.5e-33 144.4 119 75.6
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 8.5e-33 144.1 151 63.6
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.4e-32 143.3 104 79.8
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.4e-32 143.3 109 77.1
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 3.2e-32 142.1 124 69.4
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 3.2e-32 142.1 145 64.1
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 5.5e-32 141.4 140 67.9
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 7.2e-32 141.0 111 78.4
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 9.3e-32 140.6 156 60.3
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.2e-31 140.2 105 81.0
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 3.6e-31 138.7 147 61.9
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 3.6e-31 138.7 145 64.8
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 3.6e-31 138.7 118 75.4
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 4.6e-31 138.3 109 78.0
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 6.1e-31 137.9 149 60.4
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 7.9e-31 137.5 149 57.7
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.3e-30 136.7 154 59.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.8e-30 136.3 102 82.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.8e-30 136.3 115 72.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.8e-30 136.3 139 63.3
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.8e-30 136.3 114 73.7
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.8e-30 136.3 124 64.5
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.8e-30 136.3 115 73.9
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.3e-30 136.0 147 61.2
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 3.0e-30 135.6 105 78.1
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.0e-30 135.6 120 70.8
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.0e-30 135.6 144 62.5
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 3.9e-30 135.2 156 60.3
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.1e-30 134.8 147 61.9
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 5.1e-30 134.8 143 65.0
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 5.1e-30 134.8 137 63.5
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 5.1e-30 134.8 109 74.3
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 8.7e-30 134.0 103 79.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.7e-30 134.0 150 62.0
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.1e-29 133.7 147 61.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.1e-29 133.7 147 61.2
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.1e-29 133.7 147 61.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.1e-29 133.7 147 61.2
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.1e-29 133.7 116 71.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.1e-29 133.7 105 76.2
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.1e-29 133.7 103 79.6
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.1e-29 133.7 151 60.9
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.5e-29 133.3 116 74.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.5e-29 133.3 109 73.4
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 2.5e-29 132.5 103 80.6
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 2.5e-29 132.5 105 76.2
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 3.3e-29 132.1 103 77.7
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 9.7e-29 130.6 112 56.2
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.6e-28 129.8 116 72.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.6e-28 129.8 143 61.5
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.6e-28 129.8 128 60.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 3.7e-28 128.6 105 73.3
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.8e-28 128.3 103 76.7
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 4.8e-28 128.3 101 79.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 4.8e-28 128.3 110 72.7
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 6.3e-28 127.9 110 60.9
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.2e-28 127.5 145 57.9
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 8.2e-28 127.5 154 57.1
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.1e-27 127.1 121 70.2
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.1e-27 127.1 121 69.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.4e-27 126.7 118 68.6
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.8e-27 126.3 149 57.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.8e-27 126.3 108 72.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.8e-27 126.3 93 83.9
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.4e-27 125.9 139 58.3
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.1e-27 125.6 105 74.3
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.1e-27 125.6 105 74.3
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.3e-27 124.8 101 73.3
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.3e-27 124.8 102 77.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 9.1e-27 124.0 105 75.2
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.2e-26 123.6 103 72.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.5e-26 123.2 103 73.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 2.6e-26 122.5 125 60.8
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.5e-26 121.7 103 69.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 4.5e-26 121.7 105 69.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 5.9e-26 121.3 87 63.2
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.1e-24 117.1 97 77.3
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 7.2e-24 114.4 81 65.4
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.2e-23 113.6 93 79.6
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.2e-23 113.6 162 53.1
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.6e-23 113.2 106 68.9
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.6e-23 112.1 80 86.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.3e-22 109.4 107 65.4
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 5.7e-21 104.8 135 54.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 8.2e-20 100.9 108 63.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.1e-19 100.5 84 70.2
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.8e-19 99.8 76 80.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.8e-19 99.8 141 53.2
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.2e-18 97.1 72 79.2
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.6e-10 69.3 52 65.4
Cre01.g045650 Chlamydomonas reinhardtii HOM05D007253 ORTHO05D009055 8.8e-06 54.3 82 51.2


User provided reference genes

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