Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 6.4e-152 540.8 292 100.0
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 3.4e-137 491.9 271 98.5
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.2e-84 317.4 250 69.6
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.6e-84 316.2 253 67.2
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 4.4e-84 315.5 245 67.3
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.7e-83 313.5 245 65.3
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 9.2e-82 307.8 252 65.1
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 1.6e-81 307.0 266 62.4
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.6e-81 307.0 252 64.3
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.7e-80 303.5 252 63.9
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 5.0e-80 302.0 245 68.2
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 5.0e-80 302.0 245 64.5
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 5.0e-80 302.0 277 61.7
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 6.6e-80 301.6 245 64.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.1e-79 300.8 252 62.7
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 4.3e-79 298.9 276 59.8
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 6.1e-78 295.0 243 65.0
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.4e-77 293.9 245 65.7
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.8e-77 293.5 272 61.4
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 2.3e-77 293.1 245 63.3
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 3.0e-77 292.7 243 60.9
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 4.0e-77 292.4 255 64.3
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 2.6e-76 289.7 264 61.7
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.4e-76 289.3 270 59.6
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 4.4e-76 288.9 264 61.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 7.5e-76 288.1 265 60.4
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 7.5e-76 288.1 246 63.0
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 9.8e-76 287.7 264 61.4
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.3e-75 287.3 214 72.0
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.7e-75 287.0 281 58.4
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 2.2e-75 286.6 264 61.0
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 2.9e-75 286.2 244 63.5
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 4.9e-75 285.4 267 60.7
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 4.9e-75 285.4 267 60.7
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 1.8e-74 283.5 264 60.6
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 2.4e-74 283.1 246 61.8
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 5.4e-74 282.0 251 61.8
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.2e-73 280.8 241 61.0
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.2e-73 280.8 254 59.4
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 2.0e-73 280.0 279 59.5
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 2.0e-73 280.0 267 59.6
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 2.7e-73 279.6 246 59.3
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 4.6e-73 278.9 242 61.2
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 5.9e-73 278.5 241 60.6
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 3.6e-70 269.2 219 63.9
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 6.2e-70 268.5 239 60.3
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 3.1e-69 266.2 251 59.0
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 8.9e-69 264.6 251 57.4
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.2e-68 264.2 243 56.8
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 7.8e-65 251.5 209 61.2
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 7.8e-65 251.5 248 56.9
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.1e-63 247.7 209 63.2
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 4.0e-61 239.2 305 47.5
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.6e-60 236.5 214 60.7
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 1.3e-59 234.2 234 57.3
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.7e-59 233.8 203 61.6
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 4.1e-58 229.2 208 59.6
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 1.3e-56 224.2 193 62.2
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.7e-56 223.8 208 57.7
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 9.5e-55 218.0 248 51.6
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 3.1e-53 213.0 250 46.0
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 4.4e-52 209.1 150 70.7
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 6.0e-49 198.7 261 44.1
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 2.4e-37 160.2 246 41.9
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 2.4e-34 150.2 135 63.7
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 3.9e-32 142.9 95 77.9
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 2.1e-30 137.1 108 70.4
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 5.3e-29 132.5 133 57.1
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 2.4e-26 123.6 123 56.9
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.6e-25 120.9 232 36.6
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.5e-25 119.8 101 63.4
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 6.9e-21 105.5 92 63.0
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 1.5e-15 87.8 95 51.6
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 2.8e-14 83.6 149 37.6
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 3.2e-10 70.1 137 33.6
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 5.1e-08 62.8 218 24.8


User provided reference genes

Program Settings