Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 2.0e-81 305.8 165 100.0
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.8e-74 282.7 165 92.7
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 6.0e-30 134.8 175 53.7
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 4.0e-26 122.1 178 44.4
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 5.3e-26 121.7 161 49.7
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 4.5e-25 118.6 154 47.4
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 9.9e-25 117.5 172 48.8
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 7.1e-23 111.3 145 47.6
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.6e-22 110.2 174 42.5
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.6e-22 110.2 151 48.3
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 2.1e-22 109.8 150 46.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 3.0e-21 105.9 152 44.1
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 3.0e-21 105.9 187 39.6
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 3.9e-21 105.5 179 44.7
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 3.9e-21 105.5 143 44.1
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 5.1e-21 105.1 168 44.6
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 6.7e-21 104.8 160 39.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 8.7e-21 104.4 167 44.3
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.1e-20 104.0 179 39.7
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.9e-20 103.2 180 42.8
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 2.5e-20 102.8 145 42.8
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 2.5e-20 102.8 144 44.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.5e-20 102.8 148 47.3
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 7.4e-20 101.3 150 47.3
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 2.1e-19 99.8 177 40.1
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 6.2e-19 98.2 173 41.6
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.4e-18 97.1 150 44.0
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.8e-18 96.7 171 42.1
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.4e-18 96.3 149 45.0
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 4.0e-18 95.5 164 43.9
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.0e-18 95.5 151 45.0
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 9.0e-18 94.4 176 43.8
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 9.0e-18 94.4 148 42.6
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 9.0e-18 94.4 112 52.7
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 9.0e-18 94.4 165 43.6
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 3.4e-17 92.4 177 41.8
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 5.8e-17 91.7 148 41.9
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 5.8e-17 91.7 167 40.7
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 1.3e-16 90.5 167 38.3
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.9e-16 89.4 170 38.8
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.9e-16 89.4 175 41.7
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.8e-16 89.0 172 37.8
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 3.8e-16 89.0 178 41.0
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 3.8e-16 89.0 151 43.7
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 8.4e-16 87.8 176 41.5
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 1.1e-15 87.4 185 38.9
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.4e-15 87.0 177 36.7
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 2.4e-15 86.3 173 39.3
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.2e-15 85.9 175 37.7
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.2e-15 85.9 160 41.2
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 5.5e-15 85.1 191 38.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.1e-15 84.7 152 40.1
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 7.1e-15 84.7 145 42.1
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 7.1e-15 84.7 140 39.3
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 9.3e-15 84.3 151 42.4
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 9.3e-15 84.3 138 40.6
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.2e-14 84.0 164 39.0
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 1.6e-14 83.6 167 38.3
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.5e-14 82.4 125 45.6
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 7.9e-14 81.3 144 38.2
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.0e-13 80.9 143 39.2
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-13 80.1 129 41.9
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.9e-13 79.0 125 44.8
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 8.7e-13 77.8 145 40.0
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 1.5e-12 77.0 151 39.1
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.9e-12 76.6 129 41.9
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.9e-12 76.6 159 40.3
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.9e-12 76.6 159 40.3
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.3e-12 75.9 154 40.3
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 5.6e-12 75.1 192 36.5
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 5.6e-12 75.1 178 33.7
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.3e-11 73.9 174 35.1
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 1.3e-11 73.9 159 40.9
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 1.6e-11 73.6 174 39.7
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 1.6e-11 73.6 89 46.1
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 2.1e-11 73.2 178 41.6
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 8.1e-11 71.2 174 35.1
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 8.1e-11 71.2 138 39.9
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.1e-10 70.9 180 35.6
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-10 70.5 137 38.0
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.4e-10 70.5 117 41.9
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 2.4e-10 69.7 131 46.6
TAR383G0638 Trochodendron aralioides HOM05D000726 ORTHO05D000799 2.4e-10 69.7 138 38.4
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.2e-09 67.4 170 32.4
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.6e-09 66.2 141 36.9
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-09 65.5 129 38.8
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.5e-09 65.5 125 40.8
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 4.5e-09 65.5 149 37.6
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 4.5e-09 65.5 151 35.8
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 5.8e-09 65.1 183 36.1
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 7.6e-09 64.7 120 39.2
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-08 63.9 101 39.6
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.3e-08 63.9 182 34.1
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.3e-08 63.9 142 33.8
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.7e-08 63.5 152 36.2
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 1.7e-08 63.5 161 32.9
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 2.2e-08 63.2 108 43.5
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 2.2e-08 63.2 60 60.0
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.9e-08 62.8 152 36.8
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.9e-08 62.8 152 36.8
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.4e-07 60.5 103 42.7
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.4e-07 60.5 169 36.1
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 1.9e-07 60.1 145 33.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 7.1e-07 58.2 86 43.0
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 7.1e-07 58.2 136 36.0
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 7.1e-07 58.2 108 40.7
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 9.3e-07 57.8 137 34.3
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 9.3e-07 57.8 136 36.0
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-06 57.4 126 34.9
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 2.1e-06 56.6 117 39.3
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.6e-06 55.5 58 53.4
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 6.0e-06 55.1 98 37.8


User provided reference genes

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