Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 9.5e-26 120.6 134 100.0
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 4.0e-24 115.2 134 92.5
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 5.2e-16 88.2 44 90.9
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 5.8e-15 84.7 45 88.9
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 7.6e-15 84.3 48 83.3
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 7.6e-15 84.3 45 84.4
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.3e-14 83.6 45 84.4
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 1.3e-14 83.6 45 84.4
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 1.3e-14 83.6 45 77.8
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 1.4e-13 80.1 45 75.6
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 1.4e-13 80.1 45 75.6
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 1.4e-13 80.1 45 75.6
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.4e-13 80.1 44 81.8
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.9e-13 79.7 44 79.5
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 2.4e-13 79.3 44 79.5
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 2.4e-13 79.3 44 79.5
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 2.4e-13 79.3 44 79.5
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 2.4e-13 79.3 44 79.5
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 2.4e-13 79.3 47 80.9
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 2.4e-13 79.3 44 79.5
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 2.4e-13 79.3 42 85.7
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 3.2e-13 79.0 48 79.2
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 3.2e-13 79.0 45 80.0
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 4.1e-13 78.6 44 79.5
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.1e-13 78.6 44 79.5
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.1e-13 78.6 44 79.5
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.1e-13 78.6 44 79.5
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 4.1e-13 78.6 45 75.6
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 7.1e-13 77.8 45 77.8
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 7.1e-13 77.8 45 77.8
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 7.1e-13 77.8 43 81.4
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 7.1e-13 77.8 40 85.0
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 7.1e-13 77.8 43 81.4
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 9.2e-13 77.4 45 73.3
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 9.2e-13 77.4 45 75.6
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 1.2e-12 77.0 43 79.1
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.2e-12 77.0 43 79.1
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.2e-12 77.0 44 77.3
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 1.6e-12 76.6 44 75.0
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.6e-12 76.6 44 75.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 1.6e-12 76.6 44 75.0
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 2.1e-12 76.3 45 71.1
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 2.1e-12 76.3 44 72.7
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 2.7e-12 75.9 44 77.3
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 2.7e-12 75.9 44 77.3
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 3.5e-12 75.5 41 82.9
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 3.5e-12 75.5 44 77.3
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.5e-12 75.5 43 76.7
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 4.6e-12 75.1 42 78.6
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 4.6e-12 75.1 43 76.7
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 4.6e-12 75.1 45 80.0
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 6.0e-12 74.7 45 75.6
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 6.0e-12 74.7 44 75.0
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 6.0e-12 74.7 44 75.0
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 6.0e-12 74.7 42 76.2
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 7.8e-12 74.3 35 91.4
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 7.8e-12 74.3 43 74.4
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 7.8e-12 74.3 43 74.4
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 7.8e-12 74.3 42 78.6
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 7.8e-12 74.3 38 84.2
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.0e-11 73.9 44 75.0
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.3e-11 73.6 44 72.7
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.3e-11 73.6 45 80.0
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.3e-11 73.6 44 72.7
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 1.3e-11 73.6 44 72.7
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 1.3e-11 73.6 44 72.7
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.3e-11 73.6 45 77.8
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 1.7e-11 73.2 35 88.6
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 1.7e-11 73.2 45 75.6
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 1.7e-11 73.2 35 88.6
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 2.3e-11 72.8 34 91.2
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 3.0e-11 72.4 43 74.4
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 3.9e-11 72.0 35 85.7
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 5.1e-11 71.6 35 85.7
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 5.1e-11 71.6 34 88.2
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 5.1e-11 71.6 34 88.2
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 6.6e-11 71.2 41 75.6
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 8.6e-11 70.9 35 88.6
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 1.1e-10 70.5 43 74.4
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 1.1e-10 70.5 43 74.4
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 1.5e-10 70.1 39 76.9
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.5e-10 70.1 42 71.4
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 3.3e-10 68.9 44 72.7
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 3.3e-10 68.9 46 73.9
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 5.6e-10 68.2 34 79.4
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 7.3e-10 67.8 38 73.7
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 9.6e-10 67.4 33 81.8
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 9.6e-10 67.4 43 79.1
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 3.6e-09 65.5 43 69.8
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 4.7e-09 65.1 37 70.3
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 1.4e-08 63.5 35 74.3
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.0e-08 62.0 41 70.7
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 5.2e-08 61.6 35 77.1
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 6.8e-08 61.2 34 76.5
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.2e-07 60.5 49 59.2
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 1.2e-07 60.5 44 59.1
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 2.6e-07 59.3 42 66.7
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 5.8e-07 58.2 44 63.6
Gohir.A05G410800 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.8e-06 55.5 32 78.1
Gohir.D04G005100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.8e-06 55.5 32 78.1
Gorai.012G006400 Gossypium raimondii HOM05D006246 ORTHO05D007932 3.8e-06 55.5 32 78.1
Pp3c16_16780 Physcomitrium patens HOM05D006246 ORTHO05D007932 8.4e-06 54.3 44 56.8


User provided reference genes

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