Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 2.2e-43 178.7 102 100.0
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 6.1e-41 170.6 102 96.1
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 1.2e-17 93.2 106 65.1
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.4e-16 89.7 103 65.0
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 1.5e-15 86.3 98 65.3
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 2.0e-15 85.9 103 61.2
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 9.8e-15 83.6 103 57.3
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.3e-14 83.2 103 56.3
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 2.2e-14 82.4 89 62.9
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 2.9e-14 82.0 103 58.3
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 8.3e-14 80.5 103 54.4
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 1.1e-13 80.1 103 61.2
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 2.4e-13 79.0 102 58.8
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 2.4e-13 79.0 102 57.8
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 2.4e-13 79.0 105 55.2
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 3.2e-13 78.6 101 53.5
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 5.4e-13 77.8 102 54.9
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.4e-13 77.8 109 57.8
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 7.0e-13 77.4 110 60.9
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 9.2e-13 77.0 107 60.7
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 9.2e-13 77.0 95 63.2
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.0e-12 75.9 104 57.7
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 2.7e-12 75.5 103 55.3
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 6.0e-12 74.3 106 51.9
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 1.0e-11 73.6 101 57.4
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 1.3e-11 73.2 104 53.8
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 2.3e-11 72.4 103 55.3
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 2.3e-11 72.4 103 53.4
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 3.0e-11 72.0 104 54.8
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 8.6e-11 70.5 103 53.4
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 8.6e-11 70.5 104 52.9
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 1.1e-10 70.1 105 53.3
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 1.1e-10 70.1 67 64.2
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.1e-10 70.1 74 54.1
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 1.5e-10 69.7 105 53.3
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 2.5e-10 68.9 99 55.6
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 2.5e-10 68.9 105 53.3
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 3.3e-10 68.6 103 53.4
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 4.3e-10 68.2 101 51.5
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 4.3e-10 68.2 103 54.4
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 4.3e-10 68.2 57 73.7
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 4.3e-10 68.2 104 52.9
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 5.6e-10 67.8 101 51.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 5.6e-10 67.8 105 53.3
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 5.6e-10 67.8 94 58.5
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 5.6e-10 67.8 103 51.5
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 7.3e-10 67.4 98 54.1
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 7.3e-10 67.4 103 53.4
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 9.5e-10 67.0 100 50.0
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 9.5e-10 67.0 116 50.9
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 9.5e-10 67.0 103 53.4
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 1.2e-09 66.6 104 53.8
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 1.2e-09 66.6 102 53.9
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 1.2e-09 66.6 102 54.9
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 1.6e-09 66.2 97 52.6
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 1.6e-09 66.2 105 49.5
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 2.1e-09 65.9 72 56.9
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 2.1e-09 65.9 103 50.5
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 2.1e-09 65.9 105 50.5
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 3.6e-09 65.1 70 54.3
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 3.6e-09 65.1 102 52.9
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 4.7e-09 64.7 96 54.2
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 6.2e-09 64.3 94 55.3
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 8.0e-09 63.9 102 52.9
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 8.0e-09 63.9 98 46.9
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.1e-08 63.5 103 44.7
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 1.1e-08 63.5 103 50.5
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 1.4e-08 63.2 72 55.6
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 1.8e-08 62.8 102 48.0
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 3.1e-08 62.0 103 45.6
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 3.1e-08 62.0 86 52.3
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 4.0e-08 61.6 103 45.6
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 4.0e-08 61.6 103 45.6
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 4.0e-08 61.6 97 56.7
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 5.2e-08 61.2 90 55.6
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 5.2e-08 61.2 97 50.5
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 6.8e-08 60.8 103 45.6
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 6.8e-08 60.8 103 45.6
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 1.2e-07 60.1 99 50.5
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 1.2e-07 60.1 101 48.5
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 1.5e-07 59.7 100 48.0
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 1.5e-07 59.7 100 48.0
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 2.0e-07 59.3 102 50.0
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 2.0e-07 59.3 103 50.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 2.6e-07 58.9 92 48.9
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 2.6e-07 58.9 97 50.5
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 3.4e-07 58.5 94 53.2
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 3.4e-07 58.5 89 52.8
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 3.4e-07 58.5 89 52.8
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 4.4e-07 58.2 98 50.0
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 5.8e-07 57.8 97 49.5
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 7.5e-07 57.4 82 48.8
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 7.5e-07 57.4 92 51.1
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 1.3e-06 56.6 94 45.7
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 2.9e-06 55.5 52 65.4
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 6.4e-06 54.3 94 50.0
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 6.4e-06 54.3 96 45.8


User provided reference genes

Program Settings