Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 2110.9 1083 100.0
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 2054.3 1076 98.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1611.7 1078 76.5
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1567.4 1080 73.5
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1557.7 1080 71.9
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1555.4 1076 72.6
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1549.6 1086 71.5
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1546.9 1085 71.0
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1543.9 1077 72.9
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1537.7 1079 73.5
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1535.4 1086 73.1
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1531.2 1077 71.9
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1528.5 1083 71.8
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1528.5 1078 72.9
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1083 72.0
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1077 70.4
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1519.2 1079 70.7
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1518.8 1075 71.2
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1517.3 1072 72.4
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1515.7 1077 70.6
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1515.4 1109 70.0
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1513.4 1074 71.6
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1512.3 1077 70.5
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1511.1 1077 70.6
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1508.0 1082 71.3
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1502.3 1075 71.3
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1500.0 1077 70.5
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1499.2 1075 71.3
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1498.0 1093 70.7
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1497.3 1078 69.2
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1084 71.9
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1493.8 1075 71.9
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1490.3 1077 70.8
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1489.9 1077 69.5
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1489.9 1075 69.7
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1489.6 1073 71.5
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1489.2 1075 70.1
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1489.2 1076 71.4
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1488.0 1077 70.1
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1486.9 1101 68.7
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1483.0 1077 71.0
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1482.6 1078 69.9
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1482.2 1083 68.9
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1480.3 1083 70.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1478.8 1078 69.1
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1474.5 1068 69.7
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1470.3 1077 69.2
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1469.9 1077 71.6
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1469.5 1085 68.2
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1469.1 1072 70.5
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1468.4 1077 69.0
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1468.0 1075 69.9
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1466.1 1068 69.3
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1465.7 1080 69.4
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1465.3 1075 69.6
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1464.1 1068 69.1
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1464.1 1076 68.7
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1462.6 1068 69.1
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1462.2 1079 69.4
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1459.5 1074 69.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1456.4 1074 69.1
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1455.7 1079 67.7
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1450.6 1108 67.1
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1450.3 1081 68.3
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1445.6 1072 69.0
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1445.3 1076 68.1
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1441.8 1077 69.5
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1441.8 1074 68.0
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1441.0 1075 67.3
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1440.2 1076 69.1
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1439.1 1077 67.6
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1437.9 1077 68.4
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1432.5 1079 68.5
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1428.7 1081 68.6
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1426.8 1072 68.4
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1414.1 1070 68.6
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1412.1 1070 68.0
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1399.0 1069 68.7
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1393.3 1085 67.6
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1389.4 1070 66.8
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1387.1 1075 68.0
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1380.2 984 72.5
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1367.1 1077 65.3
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1345.9 1202 60.1
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1331.6 942 71.1
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1327.0 1071 63.2
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1315.8 1082 64.8
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1304.3 1128 61.5
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1283.1 1075 60.8
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1276.2 940 69.4
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1241.1 1195 56.7
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1146.0 1068 55.4
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1120.5 964 63.3
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1100.5 1083 58.1
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1093.6 763 70.5
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 7.3e-310 1067.4 759 69.4
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 1.7e-298 1029.6 759 68.5
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.0e-287 993.8 723 71.0
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 4.0e-284 981.9 1092 48.4
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 8.5e-274 947.6 1086 48.6
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.8e-250 869.0 1016 52.4
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.2e-243 847.4 721 63.1
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 6.8e-239 831.6 612 68.5
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 1.7e-229 800.4 1019 44.3
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 2.0e-214 750.4 538 71.6
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 2.7e-187 660.2 507 65.1
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 5.1e-186 656.0 1505 33.6
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 3.1e-175 620.2 653 53.3
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.3e-152 545.0 400 70.0
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.7e-128 463.8 336 70.5
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 2.4e-82 311.6 194 77.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 8.2e-51 206.8 172 64.0
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 2.5e-36 158.7 99 77.8
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.1e-23 116.7 59 88.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 9.7e-20 103.6 54 85.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 6.5e-16 90.9 65 61.5
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.2e-09 70.1 95 41.1
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.2e-09 70.1 95 41.1
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 2.7e-09 68.9 140 34.3
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.9e-07 62.8 40 67.5


User provided reference genes

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