Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 1.6e-85 319.7 196 100.0
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 2.6e-72 275.8 197 89.8
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 6.2e-50 201.4 192 70.3
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 2.6e-48 196.1 196 67.9
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 7.6e-48 194.5 196 68.4
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 2.2e-47 193.0 196 66.3
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.9e-46 189.9 191 66.5
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.9e-46 189.9 196 65.8
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 3.2e-46 189.1 195 66.2
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 3.2e-46 189.1 178 69.1
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 5.4e-46 188.3 197 65.0
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 5.4e-46 188.3 174 72.4
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 5.4e-46 188.3 164 73.2
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 7.1e-46 188.0 205 65.4
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 9.3e-46 187.6 171 70.2
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 9.3e-46 187.6 196 65.3
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 9.3e-46 187.6 170 70.6
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 9.3e-46 187.6 191 64.9
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.6e-45 186.8 164 72.6
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 2.1e-45 186.4 174 70.1
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 2.7e-45 186.0 202 61.9
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 3.5e-45 185.7 175 70.3
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 3.5e-45 185.7 189 65.6
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 4.6e-45 185.3 194 65.5
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 4.6e-45 185.3 197 63.5
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 4.6e-45 185.3 197 63.5
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.3e-44 183.7 191 66.0
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.3e-44 183.7 197 62.4
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.7e-44 183.3 191 67.0
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 2.3e-44 183.0 194 65.5
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 3.0e-44 182.6 175 69.1
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 3.0e-44 182.6 175 69.1
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 3.9e-44 182.2 174 68.4
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 3.9e-44 182.2 175 69.1
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 3.9e-44 182.2 191 66.5
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 6.6e-44 181.4 174 68.4
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 6.6e-44 181.4 174 68.4
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 6.6e-44 181.4 175 69.1
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.6e-44 181.4 196 64.3
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.6e-44 181.4 202 62.4
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 8.7e-44 181.0 197 61.4
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 8.7e-44 181.0 191 66.0
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 8.7e-44 181.0 199 63.8
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.5e-43 180.3 197 61.4
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.5e-43 180.3 198 64.6
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.5e-43 180.3 198 64.6
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 2.5e-43 179.5 174 67.2
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.5e-43 179.5 196 63.3
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 2.5e-43 179.5 159 72.3
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 7.3e-43 177.9 182 66.5
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 7.3e-43 177.9 191 62.8
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.3e-43 177.9 174 68.4
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 9.6e-43 177.6 174 67.2
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.3e-42 177.2 170 68.8
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 1.3e-42 177.2 174 67.2
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.3e-42 177.2 164 68.3
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.3e-42 177.2 196 62.2
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.3e-42 177.2 203 60.6
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 1.3e-42 177.2 191 65.4
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 1.3e-42 177.2 191 65.4
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 1.6e-42 176.8 177 66.7
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 2.8e-42 176.0 148 77.7
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.8e-42 176.0 150 76.7
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 3.6e-42 175.6 149 75.2
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 3.6e-42 175.6 174 67.2
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 4.8e-42 175.3 177 65.0
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 6.2e-42 174.9 197 63.5
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 6.2e-42 174.9 196 60.2
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 8.1e-42 174.5 174 67.2
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 8.1e-42 174.5 158 72.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 2.4e-41 172.9 209 59.3
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.1e-41 172.6 174 64.9
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 3.1e-41 172.6 174 66.7
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 4.0e-41 172.2 174 66.7
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 5.3e-41 171.8 190 61.1
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 5.3e-41 171.8 205 61.0
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 6.9e-41 171.4 198 60.6
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 9.0e-41 171.0 198 61.6
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 1.2e-40 170.6 196 57.7
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 2.0e-40 169.9 207 60.4
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 3.4e-40 169.1 154 71.4
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 4.5e-40 168.7 197 60.9
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 4.5e-40 168.7 154 71.4
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 5.8e-40 168.3 177 64.4
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 5.8e-40 168.3 196 60.2
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 1.3e-39 167.2 158 70.9
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 2.2e-39 166.4 188 60.6
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 2.9e-39 166.0 162 65.4
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 4.9e-39 165.2 152 72.4
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 4.9e-39 165.2 171 64.9
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 6.4e-39 164.9 149 73.8
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 6.4e-39 164.9 191 61.3
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-38 164.1 162 64.8
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-38 164.1 162 64.8
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 4.2e-38 162.2 193 59.6
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 9.3e-38 161.0 147 72.8
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 2.1e-37 159.8 198 60.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 3.5e-37 159.1 202 57.4
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 2.3e-36 156.4 194 58.2
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 3.0e-36 156.0 158 65.2
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.1e-35 154.1 172 64.5
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.3e-34 150.6 130 76.2
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 1.6e-34 150.2 172 59.9
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 8.1e-34 147.9 161 61.5
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 8.1e-34 147.9 204 52.9
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 6.4e-31 138.3 197 51.3
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.0e-29 131.7 202 52.5
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 3.0e-28 129.4 197 53.3
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 1.9e-27 126.7 156 58.3
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 3.7e-26 122.5 162 54.3
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.4e-25 120.6 171 53.8
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 4.5e-24 115.5 146 59.6
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 7.6e-24 114.8 104 60.6
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.0e-20 104.4 112 65.2
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 1.1e-19 100.9 178 48.3
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 3.3e-19 99.4 123 52.0
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-16 90.5 110 54.5
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 4.5e-16 89.0 71 60.6
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 4.5e-16 89.0 140 51.4
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 6.1e-13 78.6 74 51.4
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.5e-11 73.9 125 47.2


User provided reference genes

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