Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 1.8e-215 752.3 383 100.0
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 4.8e-171 604.7 397 81.4
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 2.7e-41 173.7 408 36.3
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 1.1e-39 168.3 407 35.6
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 9.6e-39 165.2 382 36.6
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 2.1e-38 164.1 409 35.5
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.1e-37 161.8 411 34.5
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 1.1e-37 161.8 414 35.3
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.4e-37 161.4 405 34.1
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 2.4e-37 160.6 409 36.2
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 6.9e-37 159.1 414 34.1
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 9.0e-37 158.7 420 32.9
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.5e-36 157.9 410 35.9
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 1.5e-36 157.9 418 34.2
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 3.4e-36 156.8 394 36.5
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 3.4e-36 156.8 410 35.6
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 3.4e-36 156.8 412 36.2
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 4.5e-36 156.4 409 35.7
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 4.5e-36 156.4 423 34.5
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 5.8e-36 156.0 434 34.3
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 2.2e-35 154.1 405 34.1
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.8e-35 153.3 410 36.1
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 4.9e-35 152.9 400 34.0
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 4.9e-35 152.9 416 33.7
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 1.1e-34 151.8 426 32.9
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 2.5e-34 150.6 420 31.0
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 5.5e-34 149.4 409 32.8
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 7.1e-34 149.1 413 33.9
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 7.1e-34 149.1 404 34.4
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 9.3e-34 148.7 410 32.4
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 1.2e-33 148.3 411 33.6
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.6e-33 147.9 408 32.8
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 4.6e-33 146.4 415 32.3
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 7.9e-33 145.6 418 34.2
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-32 145.2 405 33.6
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.3e-32 144.8 331 36.6
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 1.3e-32 144.8 406 32.5
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 1.8e-32 144.4 407 34.2
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 1.8e-32 144.4 407 34.2
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 1.8e-32 144.4 407 34.2
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 2.3e-32 144.1 412 32.5
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 2.3e-32 144.1 410 31.7
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 2.3e-32 144.1 396 34.1
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 3.9e-32 143.3 422 31.0
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 6.7e-32 142.5 397 32.7
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.1e-31 141.7 418 33.0
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 1.5e-31 141.4 405 31.6
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.9e-31 141.0 415 33.7
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 1.9e-31 141.0 404 32.7
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 3.3e-31 140.2 402 32.8
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 3.3e-31 140.2 420 33.6
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 7.4e-31 139.0 399 33.8
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 7.4e-31 139.0 411 34.3
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 1.3e-30 138.3 409 31.1
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.6e-30 137.9 381 32.8
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.8e-30 137.1 418 32.8
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 3.7e-30 136.7 419 32.2
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 3.7e-30 136.7 419 32.2
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 4.8e-30 136.3 394 32.5
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 1.4e-29 134.8 277 40.1
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.1e-29 133.7 418 32.5
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 3.1e-29 133.7 421 32.3
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.2e-28 131.7 393 31.6
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 1.5e-28 131.3 392 32.7
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 1.5e-28 131.3 393 32.6
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 2.0e-28 131.0 413 33.7
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.6e-28 130.6 414 32.6
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 2.6e-28 130.6 419 31.7
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 3.4e-28 130.2 417 32.9
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 4.5e-28 129.8 421 29.7
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 5.9e-28 129.4 398 32.2
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 1.3e-27 128.3 400 32.5
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 2.2e-27 127.5 407 32.2
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 3.8e-27 126.7 419 30.5
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 5.0e-27 126.3 401 30.9
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-26 125.2 400 31.2
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 1.1e-26 125.2 399 31.3
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 1.9e-26 124.4 413 31.5
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 3.2e-26 123.6 399 30.8
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 3.2e-26 123.6 399 30.8
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 7.2e-26 122.5 399 30.8
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 9.3e-26 122.1 358 32.1
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.7e-25 120.6 395 30.6
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 2.7e-25 120.6 408 31.6
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 4.6e-25 119.8 407 30.7
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 7.9e-25 119.0 407 30.7
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 7.9e-25 119.0 346 31.8
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 1.3e-24 118.2 400 30.0
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 3.0e-24 117.1 418 30.1
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 3.0e-24 117.1 424 30.0
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 3.9e-24 116.7 404 31.4
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 3.9e-24 116.7 418 29.7
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 6.7e-24 115.9 412 30.1
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 1.1e-23 115.2 409 30.6
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 1.5e-23 114.8 397 30.0
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 1.9e-23 114.4 416 29.1
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.5e-23 114.0 404 29.7
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 5.7e-23 112.8 399 29.6
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 7.4e-23 112.5 392 29.6
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 7.4e-23 112.5 396 29.5
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 9.7e-23 112.1 404 32.2
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 1.3e-22 111.7 397 28.7
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 2.8e-22 110.5 215 40.5
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 3.7e-22 110.2 403 29.3
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 6.3e-22 109.4 215 40.9
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 8.2e-22 109.0 408 30.4
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 8.2e-22 109.0 407 30.0
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 8.2e-22 109.0 398 29.6
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 8.2e-22 109.0 398 29.6
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 8.2e-22 109.0 421 29.5
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 8.2e-22 109.0 398 29.6
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 1.1e-21 108.6 408 29.7
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 1.8e-21 107.8 397 29.5
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 3.1e-21 107.1 388 31.2
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 3.1e-21 107.1 403 29.3
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 4.1e-21 106.7 418 28.9
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 5.3e-21 106.3 376 31.4
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 6.9e-21 105.9 338 30.2
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.2e-20 105.1 406 29.3
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.6e-20 104.0 391 29.9
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 7.7e-20 102.4 209 39.7
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.0e-19 102.1 386 29.3
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 1.3e-19 101.7 428 27.3
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.7e-19 101.3 403 29.0
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 2.9e-19 100.5 209 38.3
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 3.8e-19 100.1 393 29.3
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 6.5e-19 99.4 369 29.0
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 8.5e-19 99.0 416 27.4
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 8.5e-19 99.0 416 27.4
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 8.5e-19 99.0 416 27.4
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 1.9e-18 97.8 225 33.3
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 2.5e-18 97.4 400 28.0
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.5e-18 97.4 404 29.5
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 3.2e-18 97.1 413 28.3
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 3.2e-18 97.1 329 32.2
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 1.2e-17 95.1 366 27.0
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.1e-17 94.4 190 41.1
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 2.7e-17 94.0 402 27.4
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 3.6e-17 93.6 386 29.5
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 6.1e-17 92.8 304 32.6
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 1.4e-16 91.7 386 29.3
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 8.8e-16 89.0 381 28.3
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.5e-15 88.2 389 28.0
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 5.7e-15 86.3 412 26.0
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 1.3e-14 85.1 396 26.0
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.7e-14 84.7 244 33.2
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 1.7e-14 84.7 307 29.3
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 1.7e-14 84.7 354 27.4
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.8e-14 84.0 308 29.9
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 1.8e-13 81.3 382 26.7
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 1.8e-13 81.3 400 26.5
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 5.3e-13 79.7 379 28.2
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 5.3e-13 79.7 199 32.7
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 6.9e-13 79.3 394 28.9
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 9.1e-13 79.0 399 26.6
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 2.6e-12 77.4 386 26.2
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 7.7e-12 75.9 405 26.9
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 2.5e-10 70.9 338 26.9
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 4.7e-09 66.6 404 25.2
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 5.2e-08 63.2 108 44.4
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 8.8e-08 62.4 218 30.7
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 7.4e-07 59.3 362 25.4
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 6.3e-06 56.2 350 24.6


User provided reference genes

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