Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 0.0e+00 1110.1 556 100.0
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 4.5e-271 937.6 549 87.4
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 3.8e-121 439.5 447 55.7
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 8.1e-87 325.5 494 42.3
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 5.8e-85 319.3 494 42.1
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 5.2e-78 296.2 555 38.6
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.1e-67 261.9 491 35.2
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.1e-66 257.7 490 34.3
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.1e-66 257.7 492 34.6
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 3.9e-65 253.4 487 34.5
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 1.5e-64 251.5 487 34.3
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 2.5e-64 250.8 495 35.8
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 9.6e-64 248.8 491 32.6
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 1.6e-63 248.1 487 34.3
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 2.1e-63 247.7 500 32.8
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 4.8e-63 246.5 491 35.8
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.1e-62 245.4 483 35.8
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 1.4e-62 245.0 491 34.6
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 4.0e-62 243.4 487 33.9
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 4.0e-62 243.4 502 33.3
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 5.3e-62 243.0 488 35.5
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 9.0e-62 242.3 495 32.9
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 5.8e-61 239.6 495 33.7
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.3e-60 238.4 487 33.1
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.7e-60 238.0 489 33.1
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 1.7e-60 238.0 501 32.1
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 2.2e-60 237.7 495 32.3
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 2.2e-60 237.7 487 32.6
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 6.4e-60 236.1 505 32.7
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.1e-59 235.3 492 32.3
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 1.4e-59 235.0 494 32.0
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 3.2e-59 233.8 495 32.5
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 4.2e-59 233.4 489 34.4
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 9.3e-59 232.3 489 33.3
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 1.2e-58 231.9 489 34.6
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 1.6e-58 231.5 502 31.9
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 2.7e-58 230.7 486 32.5
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 3.5e-58 230.3 490 33.1
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 6.0e-58 229.6 499 32.5
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 7.9e-58 229.2 491 33.4
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 7.9e-58 229.2 489 33.1
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 2.3e-57 227.6 544 31.1
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 2.3e-57 227.6 495 33.1
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 2.3e-57 227.6 475 33.5
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 3.9e-57 226.9 487 32.6
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 5.1e-57 226.5 504 31.2
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 6.7e-57 226.1 495 31.3
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 1.1e-56 225.3 490 32.9
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.9e-56 224.6 482 32.4
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.9e-56 224.6 475 33.5
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 2.5e-56 224.2 488 31.1
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 4.3e-56 223.4 503 31.2
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 4.3e-56 223.4 503 31.2
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 1.3e-55 221.9 504 31.5
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.3e-55 221.9 491 31.6
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 1.3e-55 221.9 504 30.8
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.3e-55 221.9 475 33.1
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 4.8e-55 219.9 488 30.5
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-54 218.4 487 32.0
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.8e-54 218.0 486 31.3
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.8e-54 218.0 489 33.3
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.8e-54 218.0 487 32.6
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.4e-54 217.6 487 32.0
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 3.1e-54 217.2 487 32.4
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.0e-54 216.9 487 32.4
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 5.3e-54 216.5 501 30.3
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.3e-54 216.5 489 33.3
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 6.9e-54 216.1 488 31.4
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 9.0e-54 215.7 488 31.8
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.2e-53 215.3 493 31.4
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.2e-53 215.3 487 31.8
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 1.2e-53 215.3 485 31.8
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 1.5e-53 214.9 276 44.6
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 4.5e-53 213.4 478 32.0
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 4.5e-53 213.4 488 33.2
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 7.6e-53 212.6 474 29.7
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.0e-52 212.2 452 32.1
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 1.0e-52 212.2 482 31.1
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 1.7e-52 211.5 478 31.4
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 2.2e-52 211.1 483 31.5
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 2.2e-52 211.1 460 30.9
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 2.2e-52 211.1 473 32.1
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.8e-52 210.3 488 31.8
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 8.4e-52 209.1 471 31.8
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 8.4e-52 209.1 477 31.9
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 1.9e-51 208.0 484 31.0
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.5e-51 207.6 474 29.3
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 3.2e-51 207.2 490 31.0
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 4.2e-51 206.8 485 31.8
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 9.3e-51 205.7 491 29.3
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 1.6e-50 204.9 483 31.9
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.7e-50 204.1 486 31.3
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 2.7e-50 204.1 501 29.5
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 4.6e-50 203.4 460 32.2
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.6e-50 203.4 474 28.9
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 6.0e-50 203.0 473 31.3
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 2.3e-49 201.1 481 30.8
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 2.3e-49 201.1 486 31.1
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.2e-47 194.5 389 32.1
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 2.8e-47 194.1 426 31.5
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 8.2e-47 192.6 525 26.7
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.1e-46 192.2 485 30.7
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 1.4e-46 191.8 472 30.9
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.4e-46 191.8 439 31.9
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 2.4e-46 191.0 484 29.1
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 6.9e-46 189.5 483 30.6
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 9.0e-46 189.1 495 28.7
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 7.6e-45 186.0 488 29.9
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 3.8e-44 183.7 495 30.9
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 5.0e-44 183.3 463 28.3
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 4.2e-43 180.3 430 30.0
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 7.2e-43 179.5 476 30.7
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 2.1e-42 177.9 478 29.1
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 5.7e-40 169.9 489 31.1
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.7e-39 168.3 412 30.8
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 3.7e-39 167.2 390 30.8
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 4.1e-38 163.7 392 31.1
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.9e-36 157.5 210 41.9
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 5.5e-35 153.3 132 56.1
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 9.4e-35 152.5 131 56.5
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.0e-33 149.1 485 28.5
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.1e-32 145.6 438 27.6
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 7.0e-30 136.3 225 34.2
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 1.0e-28 132.5 210 36.7
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 1.0e-28 132.5 391 25.8
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 2.2e-28 131.3 463 24.0
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 1.6e-26 125.2 304 31.9
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 6.1e-26 123.2 271 34.7
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.0e-25 122.5 459 26.6
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 1.0e-25 122.5 606 24.6
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 5.2e-25 120.2 561 24.8
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 6.7e-25 119.8 304 31.6
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 6.7e-25 119.8 189 33.3
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 8.8e-25 119.4 304 31.9
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.3e-24 117.5 417 26.9
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 4.4e-24 117.1 464 26.1
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 3.5e-21 107.5 472 25.2
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 4.5e-21 107.1 263 31.2
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 8.5e-20 102.8 120 39.2
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 2.5e-19 101.3 181 37.6
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 3.2e-19 100.9 432 22.7
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 5.5e-19 100.1 154 39.6
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 1.6e-18 98.6 157 40.8
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.6e-18 97.4 193 31.1
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 4.7e-18 97.1 329 27.7
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 4.0e-17 94.0 314 26.1
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 1.5e-16 92.0 307 27.7
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 7.5e-16 89.7 160 37.5
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 2.8e-15 87.8 115 36.5
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 7.0e-14 83.2 152 30.9
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 3.8e-12 77.4 273 24.9
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.4e-09 68.9 98 34.7
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.2e-08 65.9 102 39.2
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 9.8e-08 62.8 95 42.1
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 2.2e-07 61.6 95 38.9
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 2.2e-07 61.6 74 45.9
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 1.1e-06 59.3 68 47.1
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.1e-06 57.8 65 44.6
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 9.1e-06 56.2 110 38.2


User provided reference genes

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