Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 5.1e-128 461.1 231 100.0
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 1.3e-118 429.9 233 92.7
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 1.4e-45 187.2 238 46.6
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 6.6e-43 178.3 233 45.1
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 9.3e-37 157.9 233 44.2
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 3.5e-36 156.0 236 42.8
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 3.0e-35 152.9 242 41.3
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 8.7e-35 151.4 234 41.9
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 8.7e-35 151.4 234 41.9
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 3.3e-34 149.4 234 40.2
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 4.3e-34 149.1 233 42.9
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 9.6e-34 147.9 223 41.7
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.3e-33 147.5 266 38.0
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 8.1e-33 144.8 234 40.6
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 8.1e-33 144.8 189 45.0
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 1.4e-32 144.1 234 40.2
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 1.8e-32 143.7 244 39.8
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 2.4e-32 143.3 243 39.1
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 4.0e-32 142.5 243 40.3
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 2.0e-31 140.2 225 40.4
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 9.9e-31 137.9 225 40.0
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.2e-29 132.9 225 39.6
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 9.3e-29 131.3 229 37.6
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 1.2e-28 131.0 234 37.6
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 1.6e-28 130.6 189 42.3
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 1.6e-28 130.6 242 37.6
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 3.5e-28 129.4 192 42.2
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 6.0e-28 128.6 264 36.0
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 6.0e-28 128.6 247 35.2
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 1.0e-27 127.9 235 37.9
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.3e-27 127.5 224 40.6
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 1.3e-27 127.5 235 37.4
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.8e-27 127.1 220 40.0
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 2.3e-27 126.7 196 40.8
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 3.9e-27 125.9 218 40.4
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 6.7e-27 125.2 192 40.6
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 6.7e-27 125.2 225 39.1
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 1.5e-26 124.0 216 41.2
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 1.9e-26 123.6 222 38.7
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 1.9e-26 123.6 221 38.9
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 2.5e-26 123.2 198 41.4
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 5.6e-26 122.1 232 37.1
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 1.3e-25 120.9 222 37.8
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 1.3e-25 120.9 183 39.9
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.8e-25 119.8 199 38.7
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 3.7e-25 119.4 232 34.9
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 3.1e-24 116.3 204 40.2
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 9.0e-24 114.8 172 43.6
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 2.0e-23 113.6 234 36.8
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 1.3e-22 110.9 229 34.5
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 2.2e-22 110.2 229 34.9
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 2.2e-22 110.2 230 35.2
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 1.4e-21 107.5 224 35.7
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 1.9e-21 107.1 189 40.7
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 2.7e-20 103.2 126 50.0
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 2.7e-20 103.2 224 33.9
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 3.5e-20 102.8 191 39.8
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 6.0e-20 102.1 190 38.9
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 7.9e-20 101.7 241 32.8
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 1.0e-19 101.3 199 35.7
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 2.3e-19 100.1 222 34.2
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 3.0e-19 99.8 195 39.0
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 3.9e-19 99.4 248 30.6
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 5.1e-19 99.0 250 30.8
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 1.1e-18 97.8 226 33.2
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 1.5e-18 97.4 248 29.8
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 1.5e-18 97.4 198 34.8
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 2.5e-18 96.7 125 48.8
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 3.3e-18 96.3 150 44.7
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 4.3e-18 95.9 196 34.2
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 9.6e-18 94.7 125 47.2
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 1.6e-17 94.0 231 31.6
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 1.6e-17 94.0 231 30.3
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 2.8e-17 93.2 239 30.1
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 3.7e-17 92.8 238 30.7
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 6.2e-17 92.0 194 35.6
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 8.2e-17 91.7 187 36.9
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 1.4e-16 90.9 191 36.6
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 1.4e-16 90.9 238 30.3
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 1.4e-16 90.9 187 35.3
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 1.8e-16 90.5 230 29.6
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 1.8e-16 90.5 220 30.9
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 1.8e-16 90.5 194 34.5
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 2.4e-16 90.1 217 30.9
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 2.4e-16 90.1 196 38.8
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 4.0e-16 89.4 242 31.4
Gohir.D12G083200 Gossypium hirsutum HOM05D005812 ORTHO05D007232 6.9e-16 88.6 171 38.6
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 9.0e-16 88.2 231 30.3
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 1.2e-15 87.8 192 34.9
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 1.5e-15 87.4 129 39.5
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 3.4e-15 86.3 166 36.1
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 4.5e-15 85.9 125 44.8
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 4.5e-15 85.9 174 33.3
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 5.8e-15 85.5 190 36.3
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 7.6e-15 85.1 195 34.9
Sabra07G0077200 Salix brachista HOM05D005812 ORTHO05D007232 1.0e-14 84.7 140 37.1
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 1.3e-14 84.3 195 35.9
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 1.7e-14 84.0 197 31.0
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 6.5e-14 82.0 194 36.6
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 8.4e-14 81.6 214 30.4
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 1.1e-13 81.3 124 41.9
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.1e-13 81.3 242 31.8
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 1.9e-13 80.5 217 30.0
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 3.2e-13 79.7 185 31.9
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 4.2e-13 79.3 125 43.2
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 7.1e-13 78.6 122 41.8
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 1.2e-12 77.8 187 33.7
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 1.2e-12 77.8 166 36.1
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 1.6e-12 77.4 189 32.8
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 2.7e-12 76.6 190 32.6
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 6.0e-12 75.5 188 34.0
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 1.0e-11 74.7 177 33.9
MELO3C018959.2 Cucumis melo HOM05D005812 ORTHO05D007232 1.8e-11 73.9 86 47.7
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 3.9e-11 72.8 80 52.5
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 1.5e-10 70.9 103 42.7
BcaNung00793 Brassica carinata HOM05D005812 ORTHO05D007232 1.9e-10 70.5 76 51.3
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 9.7e-10 68.2 118 40.7
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 9.7e-10 68.2 148 36.5
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 8.2e-09 65.1 185 32.4
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 8.2e-09 65.1 123 35.8
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 1.8e-08 63.9 105 39.0


User provided reference genes

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