Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO780G0001 Papaver somniferum HOM05D008326 ORTHO05D001155 7.2e-95 350.5 171 100.0
PSO384G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 5.8e-52 208.0 170 61.2
PSO333G0039 Papaver somniferum HOM05D008326 ORTHO05D001155 7.6e-52 207.6 173 60.1
PSO339G1193 Papaver somniferum HOM05D008326 ORTHO05D001155 2.7e-49 199.1 166 57.8
PSO384G4579 Papaver somniferum HOM05D008326 ORTHO05D001155 6.0e-49 198.0 168 58.9
PSO333G0040 Papaver somniferum HOM05D008326 ORTHO05D001155 7.3e-47 191.0 169 56.8
PSO384G2442 Papaver somniferum HOM05D008326 ORTHO05D001155 1.8e-45 186.4 162 59.9
PSO173G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 2.2e-43 179.5 164 57.3
PSO063G2656 Papaver somniferum HOM05D008326 ORTHO05D001155 2.9e-43 179.1 156 59.6
PSO782G3030 Papaver somniferum HOM05D008326 ORTHO05D001155 7.8e-41 171.0 156 59.6
PSO087G0001 Papaver somniferum HOM05D008326 ORTHO05D001155 3.3e-31 139.0 155 51.6
PSO210G4092 Papaver somniferum HOM05D008326 ORTHO05D001155 5.6e-31 138.3 157 48.4
PSO151G0126 Papaver somniferum HOM05D008326 ORTHO05D001155 7.3e-31 137.9 169 46.7
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 9.0e-29 131.0 162 50.6
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 1.5e-28 130.2 156 48.1
PSO675G6708 Papaver somniferum HOM05D008326 ORTHO05D001155 7.6e-28 127.9 95 64.2
PSO170G0677 Papaver somniferum HOM05D008326 ORTHO05D001155 4.9e-27 125.2 161 45.3
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 4.2e-26 122.1 157 42.0
PSO063G1347 Papaver somniferum HOM05D008326 ORTHO05D001155 5.4e-26 121.7 150 46.0
PSO210G1832 Papaver somniferum HOM05D008326 ORTHO05D001155 2.1e-25 119.8 168 41.7
PSO724G0275 Papaver somniferum HOM05D008326 ORTHO05D001155 4.6e-25 118.6 151 43.7
PSO210G7271 Papaver somniferum HOM05D008326 ORTHO05D001155 3.9e-24 115.5 155 43.9
PSO063G2324 Papaver somniferum HOM05D008326 ORTHO05D001155 5.1e-24 115.2 157 40.8
PSO210G5868 Papaver somniferum HOM05D008326 ORTHO05D001155 6.7e-24 114.8 156 44.2
PSO017G4273 Papaver somniferum HOM05D000789 ORTHO05D001155 4.3e-23 112.1 153 45.1
PSO151G0195 Papaver somniferum HOM05D008326 ORTHO05D001155 5.6e-23 111.7 87 63.2
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 9.6e-23 110.9 149 43.6
PSO210G6463 Papaver somniferum HOM05D001729 ORTHO05D001155 9.6e-23 110.9 151 41.7
PSO384G0370 Papaver somniferum HOM05D001729 ORTHO05D001155 2.8e-22 109.4 148 45.3
PSO063G5476 Papaver somniferum HOM05D008326 ORTHO05D001155 4.0e-21 105.5 156 40.4
PSO135G0788 Papaver somniferum HOM05D001729 ORTHO05D001155 1.5e-20 103.6 148 45.3
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 2.5e-15 86.3 163 39.3
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 5.7e-15 85.1 155 33.5
PSO386G0056 Papaver somniferum HOM05D001729 ORTHO05D001155 4.8e-14 82.0 153 39.9
PSO063G7655 Papaver somniferum HOM05D008326 ORTHO05D001155 1.8e-13 80.1 159 36.5
PSO063G6818 Papaver somniferum HOM05D008326 ORTHO05D001155 5.3e-13 78.6 145 39.3
PSO339G3291 Papaver somniferum HOM05D008326 ORTHO05D001155 1.2e-12 77.4 168 35.7
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 2.6e-12 76.3 157 36.3
PSO017G3628 Papaver somniferum HOM05D008326 ORTHO05D001155 5.8e-12 75.1 150 36.0
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 7.6e-12 74.7 160 35.0
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 1.3e-11 73.9 150 36.7
QL11p009094 Quercus lobata HOM05D001729 ORTHO05D001155 2.2e-11 73.2 149 36.2
PSO761G0401 Papaver somniferum HOM05D008326 ORTHO05D001155 3.8e-11 72.4 149 35.6
PSO017G6606 Papaver somniferum HOM05D008326 ORTHO05D001155 6.5e-11 71.6 155 34.2
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 1.1e-10 70.9 160 34.4
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 1.4e-10 70.5 147 35.4
PSO210G4951 Papaver somniferum HOM05D008326 ORTHO05D001155 5.5e-10 68.6 149 34.9
A09p17800 Brassica napus HOM05D002743 ORTHO05D002895 9.3e-10 67.8 150 28.7
C09p22150 Brassica napus HOM05D002743 ORTHO05D002895 9.3e-10 67.8 150 28.0
BraA09t37413Z Brassica rapa HOM05D002743 ORTHO05D002895 9.3e-10 67.8 150 28.7
Lsat_1_v5_gn_0_16480 Lactuca sativa HOM05D008898 ORTHO05D001155 9.3e-10 67.8 149 34.2
PSO407G0006 Papaver somniferum HOM05D008326 ORTHO05D001155 9.3e-10 67.8 82 42.7
BcaC04g22203 Brassica carinata HOM05D002743 ORTHO05D002895 2.1e-09 66.6 150 28.0
BolC9t55130H Brassica oleracea HOM05D002743 ORTHO05D002895 2.7e-09 66.2 150 28.0
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 2.7e-09 66.2 158 29.7
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 2.7e-09 66.2 170 33.5
Lsat_1_v5_gn_5_38600 Lactuca sativa HOM05D001729 ORTHO05D001155 6.1e-09 65.1 149 30.2
AUR62016299 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.9e-09 64.7 154 29.9
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 7.9e-09 64.7 152 32.2
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.0e-08 64.3 171 31.0
Dinv35017 Davidia involucrata HOM05D008898 ORTHO05D001155 1.0e-08 64.3 141 33.3
HanXRQChr01g0029461 Helianthus annuus HOM05D008898 ORTHO05D001155 1.0e-08 64.3 151 35.1
vmacro09289 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.0e-08 64.3 160 31.2
vmacro22920 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.0e-08 64.3 160 31.2
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 1.8e-08 63.5 169 30.8
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 1.8e-08 63.5 168 33.9
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 2.3e-08 63.2 151 29.8
Dinv34857 Davidia involucrata HOM05D001729 ORTHO05D001155 3.9e-08 62.4 146 34.2
AL5G12460 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-08 62.0 155 29.7
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 6.7e-08 61.6 158 29.7
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 6.7e-08 61.6 158 29.7
PSO210G3857 Papaver somniferum HOM05D008326 ORTHO05D001155 6.7e-08 61.6 66 56.1
Dinv26463 Davidia involucrata HOM05D000664 ORTHO05D000491 8.7e-08 61.2 162 29.6
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 8.7e-08 61.2 158 29.7
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 8.7e-08 61.2 142 32.4
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 1.1e-07 60.8 147 34.0
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 1.1e-07 60.8 141 29.8
Aa31sc58G40 Aethionema arabicum HOM05D002743 ORTHO05D002895 1.5e-07 60.5 150 30.0
AagrBONN_evm.TU.Sc2ySwM_362.2450 Anthoceros agrestis HOM05D002809 ORTHO05D009361 1.5e-07 60.5 151 30.5
COL.COLO4_29637 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.5e-07 60.5 143 28.7
Dinv04029 Davidia involucrata HOM05D001729 ORTHO05D001155 1.5e-07 60.5 157 31.2
Migut.H01240 Erythranthe guttata HOM05D007779 ORTHO05D009863 1.5e-07 60.5 154 31.2
MBI07_g06328_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 1.5e-07 60.5 149 30.2
Rhsim01G0013300 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.5e-07 60.5 144 33.3
TAR369G0887 Trochodendron aralioides HOM05D000007 ORTHO05D001644 1.5e-07 60.5 158 27.8
Aqoxy2G02516 Aquilegia oxysepala HOM05D007779 ORTHO05D009863 1.9e-07 60.1 158 29.7
AL6G17920 Arabidopsis lyrata HOM05D000664 ORTHO05D000491 1.9e-07 60.1 144 31.2
CARHR248630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.9e-07 60.1 140 35.0
Ciclev10006734m.g Citrus clementina HOM05D000007 ORTHO05D000017 1.9e-07 60.1 147 29.3
Migut.F01921 Erythranthe guttata HOM05D007779 ORTHO05D009863 1.9e-07 60.1 157 31.2
BcaB06g26601 Brassica carinata HOM05D002743 ORTHO05D002895 2.5e-07 59.7 156 31.4
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 2.5e-07 59.7 147 33.3
FAN11G3461 Fragaria x ananassa HOM05D001622 ORTHO05D002989 2.5e-07 59.7 165 32.1
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.5e-07 59.7 151 31.1
AT2G23160 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-07 59.3 152 30.9
Rhsim08G0220200 Rhododendron simsii HOM05D001729 ORTHO05D001155 3.3e-07 59.3 152 30.3
Cpa.g.sc184.7 Carica papaya HOM05D003005 ORTHO05D004170 4.3e-07 58.9 158 26.6
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 4.3e-07 58.9 145 33.1
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 4.3e-07 58.9 163 28.2
PSO801G0801 Papaver somniferum HOM05D008326 ORTHO05D001155 4.3e-07 58.9 75 45.3
Rhsim10G0184400 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.3e-07 58.9 151 32.5
BcaB07g31193 Brassica carinata HOM05D002743 ORTHO05D002895 5.7e-07 58.5 146 29.5
A07p08150 Brassica napus HOM05D002743 ORTHO05D002895 5.7e-07 58.5 154 29.9
BraA07t28599Z Brassica rapa HOM05D002743 ORTHO05D002895 5.7e-07 58.5 154 29.9
ECA247G2297 Erigeron canadensis HOM05D000030 ORTHO05D000031 5.7e-07 58.5 146 32.2
PSO421G0181 Papaver somniferum HOM05D008326 ORTHO05D001155 5.7e-07 58.5 70 45.7
QL06p006111 Quercus lobata HOM05D001729 ORTHO05D001155 5.7e-07 58.5 151 30.5
AT1G47300 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.4e-07 58.2 153 33.3
CARHR042520 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.4e-07 58.2 153 30.7
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 7.4e-07 58.2 158 27.2
AUR62037325 Chenopodium quinoa HOM05D001808 ORTHO05D021205 7.4e-07 58.2 152 28.9
AUR62043907 Chenopodium quinoa HOM05D021952 ORTHO05D021205 7.4e-07 58.2 152 28.9
Migut.C01223 Erythranthe guttata HOM05D000007 ORTHO05D000521 7.4e-07 58.2 144 34.0
Thhalv10006464m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.4e-07 58.2 156 30.1
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.4e-07 58.2 158 30.4
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.4e-07 58.2 158 30.4
Lsat_1_v5_gn_9_51481 Lactuca sativa HOM05D000664 ORTHO05D000491 7.4e-07 58.2 153 32.0
Sed0008353 Sechium edule HOM05D003005 ORTHO05D004170 7.4e-07 58.2 149 30.9
FvH4_1g13850 Fragaria vesca HOM05D000007 ORTHO05D000017 9.7e-07 57.8 169 32.0
PSO063G7563 Papaver somniferum HOM05D008326 ORTHO05D001155 9.7e-07 57.8 69 49.3
Aqoxy3G01081 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.3e-06 57.4 160 28.1
AL1G45580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 57.4 154 31.8
HanXRQChr15g0474391 Helianthus annuus HOM05D008898 ORTHO05D001155 1.3e-06 57.4 145 30.3
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 1.3e-06 57.4 143 31.5
Aqoxy5G02276 Aquilegia oxysepala HOM05D002809 ORTHO05D004939 1.6e-06 57.0 165 28.5
Aqoxy6G00425 Aquilegia oxysepala HOM05D000664 ORTHO05D010440 1.6e-06 57.0 156 27.6
Duzib268G1516 Durio zibethinus HOM05D000007 ORTHO05D000039 1.6e-06 57.0 147 27.9
ECA232G2763 Erigeron canadensis HOM05D000664 ORTHO05D000491 1.6e-06 57.0 148 33.1
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-06 57.0 163 31.9
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 1.6e-06 57.0 144 31.9
PSO724G0563 Papaver somniferum HOM05D008326 ORTHO05D001155 1.6e-06 57.0 157 33.1
SEGI_09375 Sequoiadendron giganteum HOM05D003005 ORTHO05D004170 1.6e-06 57.0 149 28.9
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 1.6e-06 57.0 156 27.6
vmacro06138 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 1.6e-06 57.0 156 29.5
CARHR043710 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-06 56.6 153 28.1
AUR62035201 Chenopodium quinoa HOM05D021952 ORTHO05D021205 2.2e-06 56.6 152 28.3
Migut.L01260 Erythranthe guttata HOM05D001729 ORTHO05D001155 2.2e-06 56.6 139 30.2
Hma1.2p1_0788F.1_g218140 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.2e-06 56.6 163 28.2
QL04p018874 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-06 56.6 150 30.0
QL04p019213 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-06 56.6 164 26.8
Aa31LG3G18820 Aethionema arabicum HOM05D000664 ORTHO05D000491 2.8e-06 56.2 162 29.0
MD13G1235200 Malus domestica HOM05D000664 ORTHO05D000491 2.8e-06 56.2 170 28.2
PSO339G3943 Papaver somniferum HOM05D000007 ORTHO05D000017 2.8e-06 56.2 169 26.6
RcHm_v2.0_Chr4g0396041 Rosa chinensis HOM05D000664 ORTHO05D000491 2.8e-06 56.2 151 30.5
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 3.7e-06 55.8 143 28.7
BcaC06g35666 Brassica carinata HOM05D002743 ORTHO05D002895 3.7e-06 55.8 156 29.5
CARHR131260 Cardamine hirsuta HOM05D002743 ORTHO05D002895 3.7e-06 55.8 150 28.7
ClCG05G000990 Citrullus lanatus HOM05D003005 ORTHO05D004170 3.7e-06 55.8 149 30.2
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.7e-06 55.8 144 30.6
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 3.7e-06 55.8 145 32.4
Lj2C804T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.7e-06 55.8 152 30.3
MD07G1142500 Malus domestica HOM05D003005 ORTHO05D004170 3.7e-06 55.8 144 31.2
Psat4g020960 Pisum sativum HOM05D001729 ORTHO05D001155 3.7e-06 55.8 166 27.7
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-06 55.8 158 27.2
QL07p003126 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-06 55.8 151 27.8
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.7e-06 55.8 141 35.5
RcHm_v2.0_Chr2g0154581 Rosa chinensis HOM05D000007 ORTHO05D000017 3.7e-06 55.8 171 29.2
BcaB08g34488 Brassica carinata HOM05D000171 ORTHO05D000101 4.8e-06 55.5 158 29.1
BcaB08g37317 Brassica carinata HOM05D002743 ORTHO05D002895 4.8e-06 55.5 163 28.8
BolC7t41698H Brassica oleracea HOM05D002743 ORTHO05D002895 4.8e-06 55.5 156 29.5
DCAR_027195 Daucus carota HOM05D000007 ORTHO05D000039 4.8e-06 55.5 148 28.4
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 4.8e-06 55.5 165 30.9
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 4.8e-06 55.5 165 30.9
Lsat_1_v5_gn_9_51281 Lactuca sativa HOM05D000664 ORTHO05D000491 4.8e-06 55.5 145 32.4
Lsat_1_v5_gn_9_51601 Lactuca sativa HOM05D000664 ORTHO05D000491 4.8e-06 55.5 144 33.3
PSO675G5108 Papaver somniferum HOM05D008326 ORTHO05D001155 4.8e-06 55.5 167 29.3
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 6.3e-06 55.1 151 31.1
Lsat_1_v5_gn_9_51641 Lactuca sativa HOM05D000043 ORTHO05D016156 6.3e-06 55.1 150 31.3
RcHm_v2.0_Chr3g0471851 Rosa chinensis HOM05D000007 ORTHO05D015648 6.3e-06 55.1 164 31.1
TAR636G3621 Trochodendron aralioides HOM05D003005 ORTHO05D004170 6.3e-06 55.1 163 27.6
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 8.2e-06 54.7 150 31.3
AL3G39540 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 8.2e-06 54.7 143 28.7
AT2G15640 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.2e-06 54.7 155 26.5
C07p12300 Brassica napus HOM05D002743 ORTHO05D002895 8.2e-06 54.7 156 28.8
Gohir.A12G196800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 8.2e-06 54.7 163 30.1
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.2e-06 54.7 142 31.7
Thecc.01G349400 Theobroma cacao HOM05D003005 ORTHO05D004170 8.2e-06 54.7 144 28.5


User provided reference genes

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