Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 4.2e-231 804.3 394 100.0
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 4.2e-215 751.1 396 93.4
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.6e-145 520.0 397 64.7
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 8.4e-139 497.7 394 62.7
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 1.8e-128 463.4 388 60.1
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 9.0e-125 451.1 387 59.4
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.7e-115 420.2 404 53.7
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.7e-115 420.2 403 53.6
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.2e-113 414.1 401 53.1
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.3e-112 409.8 394 51.8
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 3.3e-111 406.0 402 51.5
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 9.7e-111 404.4 401 50.9
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 2.8e-110 402.9 403 51.1
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.1e-109 401.0 404 51.0
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.5e-108 397.1 397 49.6
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 2.2e-107 393.3 396 50.3
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 2.2e-107 393.3 398 51.5
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 2.9e-107 392.9 406 50.2
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 6.5e-107 391.7 404 50.0
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.4e-106 390.6 389 51.2
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.9e-106 390.2 397 49.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 4.2e-106 389.0 391 48.8
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 9.4e-106 387.9 400 49.5
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 6.1e-105 385.2 384 49.7
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.1e-103 380.9 398 50.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.0e-103 380.2 398 50.5
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 9.7e-103 377.9 400 50.0
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 3.7e-102 375.9 402 48.5
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 6.3e-102 375.2 391 49.4
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.4e-101 374.0 407 49.6
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 4.1e-101 372.5 384 50.5
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.0e-101 371.7 320 55.6
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.5e-100 369.4 384 50.5
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 3.5e-100 369.4 404 48.3
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 4.5e-100 369.0 384 50.3
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.8e-99 365.9 401 47.1
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 3.8e-99 365.9 406 46.3
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.5e-98 364.0 396 47.7
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 4.2e-98 362.5 364 51.1
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 2.7e-97 359.8 399 48.6
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.6e-97 359.4 320 54.4
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.8e-96 357.1 395 46.8
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.0e-96 356.3 393 46.6
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 6.7e-96 355.1 400 48.5
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.2e-94 350.1 361 49.0
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 6.3e-94 348.6 320 53.4
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.1e-93 347.8 400 44.0
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.4e-93 346.7 393 45.5
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.4e-93 346.7 400 43.8
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 4.1e-93 345.9 394 44.9
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 5.3e-93 345.5 399 48.1
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 1.2e-92 344.4 394 45.7
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.0e-91 341.3 392 45.9
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.3e-91 340.9 391 45.8
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 3.8e-91 339.3 392 45.7
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 3.8e-91 339.3 392 45.7
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 3.8e-91 339.3 392 45.7
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 8.5e-91 338.2 385 46.0
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 4.2e-90 335.9 395 45.6
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.4e-85 318.9 325 49.8
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.7e-83 313.9 362 45.6
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 2.5e-82 310.1 364 43.7
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 2.1e-81 307.0 362 44.2
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 4.5e-76 289.3 389 40.4
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.1e-74 284.6 298 47.3
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.0e-72 276.2 389 41.6
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 5.2e-72 275.8 347 41.5
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.2e-71 274.6 309 50.8
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 3.3e-66 256.5 393 37.4
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 7.8e-44 182.2 203 45.3
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 6.6e-43 179.1 236 39.4
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.9e-26 124.4 136 41.9
HanXRQChr05g0146451 Helianthus annuus HOM05D000007 ORTHO05D009073 1.3e-06 58.5 189 27.5
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 8.5e-06 55.8 135 27.4


User provided reference genes

Program Settings