Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 6.8e-159 563.9 280 100.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 4.7e-144 514.6 278 91.7
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.8e-74 283.5 281 56.2
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 3.0e-74 282.7 282 56.0
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 5.7e-73 278.5 281 56.2
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 2.8e-72 276.2 281 54.1
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.8e-72 276.2 281 56.2
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 3.1e-71 272.7 278 53.6
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.2e-69 266.5 283 52.3
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.2e-68 262.7 248 57.7
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-68 262.7 251 57.8
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.2e-67 260.8 282 51.1
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.6e-67 260.4 277 52.0
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 4.7e-67 258.8 275 52.0
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 6.1e-67 258.5 277 52.3
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 8.0e-67 258.1 277 52.3
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.0e-66 255.8 282 48.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.8e-66 255.0 277 52.7
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 8.8e-66 254.6 278 52.5
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 2.0e-65 253.4 277 50.9
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.6e-65 253.1 281 52.0
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 3.4e-65 252.7 254 54.7
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 5.7e-65 251.9 277 50.2
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 7.5e-65 251.5 278 50.7
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.7e-64 250.4 278 50.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.8e-64 249.6 242 55.8
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 3.7e-64 249.2 247 54.7
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.1e-63 247.7 224 60.3
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.8e-63 246.9 278 50.7
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.2e-62 244.2 277 48.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.2e-62 244.2 275 49.8
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.0e-62 243.4 282 50.4
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 2.7e-62 243.0 248 53.6
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 4.5e-62 242.3 282 50.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.0e-61 241.1 281 49.8
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.0e-61 241.1 248 53.2
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.3e-61 240.7 214 57.9
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 8.5e-61 238.0 264 51.9
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.1e-60 237.7 283 48.1
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.5e-60 237.3 283 50.5
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.5e-60 237.3 248 51.2
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 9.4e-60 234.6 254 51.6
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 9.4e-60 234.6 250 51.2
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.2e-59 234.2 250 51.6
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.2e-59 234.2 259 49.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.6e-59 233.8 280 47.1
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.6e-59 232.6 250 52.4
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.6e-59 232.6 249 51.0
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 4.7e-59 232.3 289 45.0
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.4e-58 230.7 252 51.6
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.4e-58 230.7 248 50.8
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.3e-58 229.9 205 57.1
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.0e-58 229.2 258 48.8
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 6.8e-58 228.4 280 46.1
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 8.8e-58 228.0 283 49.5
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.2e-57 227.6 288 48.3
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.5e-57 227.3 278 48.2
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 2.0e-57 226.9 279 46.2
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 3.4e-57 226.1 279 47.3
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 3.4e-57 226.1 278 45.7
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.4e-57 225.7 279 46.2
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 9.8e-57 224.6 281 46.3
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.3e-56 224.2 280 47.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.7e-56 223.8 282 46.1
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.7e-56 222.6 279 46.2
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 3.7e-56 222.6 282 47.5
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 3.7e-56 222.6 251 49.0
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 3.7e-56 222.6 253 49.4
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 4.9e-56 222.2 280 47.5
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.0e-54 216.9 284 45.4
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 2.7e-54 216.5 249 48.6
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.5e-54 215.7 218 54.1
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 5.9e-54 215.3 277 46.9
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.0e-53 214.5 246 47.6
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.0e-53 214.5 246 47.6
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.0e-53 212.2 279 47.0
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 6.6e-53 211.8 289 45.7
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.5e-52 210.7 256 49.2
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.5e-52 210.7 210 54.8
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 2.3e-50 203.4 241 51.0
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 8.9e-50 201.4 240 47.1
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 4.4e-49 199.1 253 46.6
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.5e-49 198.4 204 53.4
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 9.8e-49 198.0 277 44.4
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 2.0e-46 190.3 175 56.0
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.7e-46 189.9 200 53.5
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 5.0e-45 185.7 282 38.7
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 5.0e-45 185.7 204 47.5
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 6.6e-45 185.3 209 51.2
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 3.3e-44 183.0 203 50.2
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 4.3e-44 182.6 252 43.3
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 6.1e-43 178.7 169 53.3
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 3.7e-40 169.5 278 41.4
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 7.0e-39 165.2 232 42.7
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 2.0e-38 163.7 206 44.2
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 6.0e-38 162.2 187 49.7
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.3e-37 160.2 188 44.7
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 3.0e-37 159.8 215 43.7
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.6e-35 152.9 241 41.1
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.2e-33 147.9 205 40.0
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 6.6e-29 132.1 182 45.1
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 6.6e-29 132.1 144 49.3
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.6e-27 126.3 177 45.8
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.2e-24 117.1 121 53.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-21 106.3 79 67.1
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.2e-19 101.3 114 48.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.9e-17 91.7 185 36.8
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.3e-16 91.3 65 63.1
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.2e-15 86.7 165 34.5
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.8e-14 82.0 56 66.1
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 8.7e-13 78.6 70 58.6
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 7.3e-12 75.5 186 28.0
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.9e-08 62.8 58 55.2
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.3e-07 58.5 59 50.8
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.2e-06 58.2 95 37.9
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.6e-06 57.8 53 54.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 3.5e-06 56.6 96 38.5


User provided reference genes

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