Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 4.7e-164 581.3 320 100.0
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 1.9e-80 303.5 338 53.6
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.6e-77 293.1 323 53.6
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 6.3e-76 288.5 322 52.5
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 5.3e-75 285.4 326 53.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 2.0e-74 283.5 307 52.8
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.7e-73 280.4 322 52.5
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.3e-70 270.0 322 53.1
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 5.2e-70 268.9 318 48.4
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 8.8e-70 268.1 322 46.9
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.8e-67 260.4 324 45.4
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.4e-67 260.0 323 48.0
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 3.1e-67 259.6 330 52.4
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 5.3e-67 258.8 322 45.3
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 7.0e-67 258.5 328 47.9
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 3.5e-66 256.1 320 45.6
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 4.5e-66 255.8 322 46.0
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 7.7e-66 255.0 323 44.9
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 2.2e-65 253.4 333 46.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 8.5e-65 251.5 319 48.0
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 1.9e-64 250.4 322 46.3
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 4.2e-64 249.2 328 44.5
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 9.4e-64 248.1 310 50.3
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.2e-63 247.7 334 47.0
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.2e-63 247.7 321 47.7
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 4.7e-63 245.7 338 45.3
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 6.8e-62 241.9 326 46.3
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 2.0e-61 240.4 329 45.3
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 2.6e-61 240.0 318 47.2
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.4e-61 239.6 317 45.1
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 9.8e-61 238.0 317 45.1
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.3e-60 237.7 325 44.6
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.7e-60 237.3 317 45.1
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.7e-60 237.3 321 42.1
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 2.2e-60 236.9 326 43.6
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.2e-60 236.9 325 44.9
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 2.8e-60 236.5 313 44.1
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 3.7e-60 236.1 324 48.5
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.1e-59 234.6 324 43.8
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 1.4e-59 234.2 317 42.6
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.8e-59 233.8 321 48.0
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 3.1e-59 233.0 309 43.7
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.1e-59 233.0 321 43.6
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 2.0e-58 230.3 319 46.1
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 2.7e-58 229.9 320 44.7
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 1.0e-57 228.0 325 42.2
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.0e-57 228.0 339 42.2
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.3e-57 227.6 321 48.3
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 8.6e-57 224.9 325 42.2
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 8.6e-57 224.9 317 42.3
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 2.5e-56 223.4 321 48.0
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.5e-56 223.4 321 48.0
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 3.2e-56 223.0 319 43.3
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 1.6e-55 220.7 322 41.3
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.6e-55 220.7 322 43.5
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.1e-55 220.3 329 44.1
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.1e-55 220.3 324 43.2
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 2.8e-55 219.9 331 40.5
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 2.8e-55 219.9 324 42.9
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 3.6e-55 219.5 319 41.7
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 3.6e-55 219.5 332 40.4
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 4.7e-55 219.2 319 43.6
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 6.1e-55 218.8 319 41.1
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 6.1e-55 218.8 332 39.8
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.4e-54 217.6 322 41.0
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.4e-54 217.6 317 42.0
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 1.8e-54 217.2 318 45.0
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 1.8e-54 217.2 330 41.5
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 2.3e-54 216.9 321 42.4
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 2.3e-54 216.9 323 41.8
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 4.0e-54 216.1 320 41.2
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 1.2e-53 214.5 324 44.1
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 2.6e-53 213.4 324 44.1
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 7.5e-53 211.8 326 44.5
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 7.5e-53 211.8 324 42.6
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 7.5e-53 211.8 322 39.8
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 3.7e-52 209.5 298 49.0
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 6.3e-52 208.8 321 39.9
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 5.4e-51 205.7 313 44.7
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.4e-51 205.7 307 40.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 9.2e-51 204.9 326 39.9
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 1.2e-50 204.5 323 43.7
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.6e-50 204.1 321 39.3
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 2.7e-50 203.4 317 37.5
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 4.5e-50 202.6 333 40.5
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 5.9e-50 202.2 305 41.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 7.8e-50 201.8 318 39.6
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 7.8e-50 201.8 307 40.4
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 5.0e-49 199.1 320 42.8
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.1e-48 198.0 323 36.8
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 4.3e-48 196.1 337 39.2
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 2.1e-47 193.7 318 41.2
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 6.8e-46 188.7 309 40.1
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 8.9e-46 188.3 339 36.6
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 1.4e-43 181.0 303 39.6
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 7.0e-43 178.7 274 40.5
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 2.0e-42 177.2 321 35.5
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 2.7e-42 176.8 312 37.5
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 8.6e-41 171.8 398 32.9
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 2.8e-39 166.8 199 49.2
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 1.3e-36 157.9 357 32.5
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 3.2e-35 153.3 187 48.1
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 5.0e-33 146.0 189 47.6
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.1e-30 136.7 299 32.8
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 4.0e-30 136.3 322 34.5
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 5.8e-29 132.5 321 32.7
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 7.5e-29 132.1 220 34.5
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 3.9e-25 119.8 394 25.9
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 2.5e-24 117.1 169 40.8
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.6e-23 113.2 142 45.8
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.4e-22 110.5 309 35.0
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 3.1e-22 110.2 353 28.0
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 2.0e-21 107.5 194 37.6
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.0e-21 107.5 191 36.6
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 2.6e-13 80.5 130 36.9
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 4.4e-13 79.7 79 53.2
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 3.8e-12 76.6 98 36.7
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.9e-08 64.3 70 54.3
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 3.6e-07 60.1 82 39.0


User provided reference genes

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