Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 8.9e-99 363.6 185 100.0
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 3.5e-95 351.7 185 98.4
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 6.2e-76 287.7 185 77.8
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.9e-72 276.2 185 76.8
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.1e-71 272.7 185 73.5
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 3.0e-70 268.9 185 73.5
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.9e-69 266.2 185 73.5
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.3e-69 265.0 186 74.2
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 6.9e-67 257.7 185 71.9
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.9e-67 257.7 186 72.0
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 6.9e-67 257.7 185 70.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 9.0e-67 257.3 185 70.8
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 1.2e-66 256.9 186 72.6
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.2e-66 256.9 186 72.6
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.5e-66 256.5 185 70.8
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 7.6e-66 254.2 185 70.8
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 9.9e-66 253.8 185 71.9
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 2.2e-65 252.7 185 68.6
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.2e-65 252.7 185 71.4
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 1.9e-64 249.6 185 70.8
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.9e-64 249.6 185 71.9
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 2.4e-64 249.2 185 71.4
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.4e-64 249.2 185 69.2
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.2e-64 248.8 185 70.8
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.2e-64 248.8 184 72.3
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.1e-63 246.1 184 67.4
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 2.7e-63 245.7 185 70.3
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 4.6e-63 245.0 185 70.8
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 7.9e-63 244.2 188 70.2
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.8e-62 243.0 184 66.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.3e-62 242.7 185 70.3
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.3e-62 242.7 185 69.2
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.9e-62 241.9 185 69.7
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 3.9e-62 241.9 184 67.4
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 5.1e-62 241.5 185 69.7
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 8.7e-62 240.7 185 68.1
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.1e-61 240.4 185 67.6
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.1e-61 240.4 185 66.5
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.9e-61 239.6 185 68.6
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.9e-61 239.6 185 66.5
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.9e-61 239.6 185 67.6
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 3.3e-61 238.8 185 68.6
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 5.6e-61 238.0 187 68.4
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 5.6e-61 238.0 185 68.1
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 5.6e-61 238.0 185 70.3
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 5.6e-61 238.0 185 67.0
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.3e-60 236.9 185 67.6
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 8.1e-60 234.2 185 66.5
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.3e-59 231.5 185 66.5
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.3e-59 231.5 185 66.5
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 6.9e-59 231.1 186 66.1
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 6.9e-59 231.1 185 63.2
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.5e-58 229.9 186 65.6
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.0e-58 229.6 185 65.4
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.6e-58 229.2 188 63.3
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 3.4e-58 228.8 188 63.8
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 5.8e-58 228.0 185 65.9
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 7.6e-58 227.6 173 68.8
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 7.6e-58 227.6 186 65.6
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 7.6e-58 227.6 186 65.1
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.3e-57 226.9 168 70.8
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.7e-57 226.5 184 62.0
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.7e-57 226.5 183 65.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.8e-57 225.3 186 64.5
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 6.5e-57 224.6 184 64.1
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.1e-56 223.8 151 72.2
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.4e-56 223.4 152 71.7
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 7.1e-56 221.1 199 59.3
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 7.1e-56 221.1 184 61.4
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 9.3e-56 220.7 152 72.4
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 1.2e-55 220.3 184 63.6
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.6e-55 219.9 186 62.9
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 6.0e-55 218.0 184 64.1
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 7.9e-55 217.6 151 70.9
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.0e-54 217.2 145 73.1
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.0e-54 217.2 186 65.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.0e-54 215.7 160 63.8
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 6.7e-54 214.5 189 62.4
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 5.7e-53 211.5 186 64.0
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 5.7e-53 211.5 185 58.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 7.4e-53 211.1 187 58.8
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.3e-52 210.3 187 60.4
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.6e-52 209.9 168 67.3
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 8.2e-52 207.6 152 67.8
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.4e-51 206.8 185 58.9
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 1.4e-51 206.8 162 64.2
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.8e-51 206.5 186 58.6
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 2.4e-51 206.1 167 62.3
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 2.4e-51 206.1 190 58.9
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 3.1e-51 205.7 185 56.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 4.1e-51 205.3 190 56.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 4.1e-51 205.3 114 86.0
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 5.3e-51 204.9 166 62.7
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 5.3e-51 204.9 146 67.8
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.5e-50 203.4 132 73.5
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.6e-50 202.6 116 81.9
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 4.5e-50 201.8 190 55.8
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 5.9e-50 201.4 163 62.6
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 5.9e-50 201.4 163 62.6
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 7.6e-50 201.1 190 56.8
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.0e-49 200.7 185 56.8
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 2.2e-49 199.5 116 81.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.2e-49 199.5 192 58.3
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 2.9e-49 199.1 185 56.2
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 6.5e-49 198.0 153 63.4
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 6.5e-49 198.0 190 56.8
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 8.5e-49 197.6 190 55.3
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 8.5e-49 197.6 115 81.7
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.1e-47 193.0 115 79.1
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 6.1e-47 191.4 177 55.9
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 5.1e-46 188.3 180 55.0
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 6.7e-46 188.0 171 60.2
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.1e-43 180.6 160 56.9
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 5.3e-43 178.3 185 57.8
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.7e-41 173.3 128 61.7
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.9e-40 169.9 115 69.6
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 2.5e-40 169.5 108 70.4
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 5.3e-35 151.8 110 60.9
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 7.7e-34 147.9 125 60.0
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 1.3e-33 147.1 140 50.7
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 2.5e-32 142.9 106 58.5
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 4.2e-32 142.1 117 53.0
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 4.8e-28 128.6 106 68.9
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.4e-22 110.5 175 41.1
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.4e-22 110.5 68 79.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.8e-22 110.2 59 84.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.8e-22 110.2 59 84.7
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.7e-18 96.3 111 54.1
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 3.2e-16 89.4 49 85.7


User provided reference genes

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