Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 6.1e-131 471.1 287 100.0
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.4e-122 443.4 288 95.1
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.7e-64 250.4 229 68.6
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 4.2e-63 245.7 216 67.6
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 4.2e-63 245.7 213 68.5
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 5.5e-63 245.4 213 68.5
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.2e-62 244.2 213 69.5
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 2.1e-62 243.4 216 68.1
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.7e-62 243.0 201 71.1
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.7e-62 243.0 221 67.9
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.7e-62 243.0 220 65.9
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.7e-62 243.0 230 66.5
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 3.6e-62 242.7 215 67.4
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.6e-62 242.7 214 69.2
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 4.6e-62 242.3 201 70.1
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 6.1e-62 241.9 214 69.2
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.1e-62 241.9 228 65.4
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 6.1e-62 241.9 228 65.4
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.4e-61 240.7 218 65.1
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.4e-61 240.7 218 65.1
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.4e-61 240.7 222 67.1
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.8e-61 240.4 226 65.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.8e-61 240.4 216 67.1
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.3e-61 240.0 201 70.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 3.0e-61 239.6 201 70.1
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 3.0e-61 239.6 201 71.1
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 3.0e-61 239.6 218 65.6
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 3.9e-61 239.2 216 68.1
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 6.7e-61 238.4 226 65.9
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 6.7e-61 238.4 218 66.1
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.7e-61 238.4 228 64.9
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 8.8e-61 238.0 216 66.7
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 8.8e-61 238.0 201 69.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.1e-60 237.7 216 68.5
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.1e-60 237.7 216 69.0
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.0e-60 236.9 197 70.1
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 2.5e-60 236.5 219 65.8
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 2.5e-60 236.5 191 71.7
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 2.5e-60 236.5 230 63.9
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.3e-60 236.1 219 66.2
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.3e-60 235.7 221 66.5
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.7e-60 235.3 219 66.2
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 5.7e-60 235.3 213 66.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 7.4e-60 235.0 206 68.4
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 9.7e-60 234.6 202 70.3
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 9.7e-60 234.6 214 66.4
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.3e-59 234.2 216 67.1
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.3e-59 234.2 216 67.1
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.3e-59 234.2 201 69.7
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.7e-59 233.8 167 69.5
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.7e-59 233.8 246 60.6
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 1.7e-59 233.8 231 63.2
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.8e-59 233.0 157 73.2
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 2.8e-59 233.0 214 65.0
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 3.7e-59 232.6 213 66.2
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 6.3e-59 231.9 216 66.2
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.2e-59 231.5 168 69.6
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 8.2e-59 231.5 216 66.2
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 8.2e-59 231.5 201 69.2
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.1e-58 231.1 201 69.7
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.4e-58 230.7 206 68.0
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.8e-58 230.3 214 66.8
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.8e-58 230.3 201 68.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.8e-58 230.3 214 66.8
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.8e-58 230.3 214 66.8
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.4e-58 229.9 216 66.2
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 3.1e-58 229.6 215 65.6
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 4.1e-58 229.2 207 67.6
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 5.3e-58 228.8 238 62.6
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 6.9e-58 228.4 212 65.6
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 9.1e-58 228.0 208 66.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.2e-57 227.6 221 63.8
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 1.2e-57 227.6 221 63.8
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 2.0e-57 226.9 213 65.3
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 2.6e-57 226.5 206 66.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.6e-57 226.5 201 65.7
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.0e-56 224.6 221 63.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.0e-56 224.6 211 63.5
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.0e-56 224.6 213 63.4
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.3e-56 224.2 205 64.4
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.7e-56 223.8 206 64.1
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 5.0e-56 222.2 253 54.9
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 6.5e-56 221.9 201 67.2
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.1e-55 221.1 168 67.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.9e-55 220.3 232 58.2
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.5e-55 219.9 201 66.7
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.2e-55 219.5 191 68.6
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 9.4e-55 218.0 149 73.8
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.1e-54 216.9 310 53.5
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 6.7e-53 211.8 167 65.9
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 6.7e-53 211.8 167 65.9
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 6.7e-53 211.8 167 65.9
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 6.7e-53 211.8 167 65.9
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 8.8e-53 211.5 167 65.3
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.5e-52 210.7 219 61.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.5e-52 210.7 214 59.3
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.0e-52 210.3 167 65.3
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.7e-51 207.2 221 54.3
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.0e-49 200.3 167 62.3
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.3e-48 197.6 239 53.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.9e-45 186.0 161 62.1
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.9e-45 186.0 161 62.1
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 6.7e-45 185.3 204 52.5
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.8e-45 184.9 170 61.2
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.8e-45 184.9 170 61.2
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 5.7e-44 182.2 162 56.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 5.5e-39 165.6 153 69.3
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 8.5e-32 141.7 163 51.5
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 2.0e-28 130.6 225 44.4
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 4.1e-26 122.9 170 44.1
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 9.1e-26 121.7 169 43.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 2.0e-17 94.0 141 40.4
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 2.7e-17 93.6 125 45.6
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 5.2e-13 79.3 63 63.5
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 4.1e-10 69.7 95 47.4
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 6.0e-09 65.9 166 33.1
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 2.3e-08 63.9 87 44.8


User provided reference genes

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