Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 5.4e-220 767.3 376 100.0
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 6.7e-202 707.2 459 79.7
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 4.2e-103 379.0 497 44.1
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 6.2e-99 365.2 457 43.5
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.0e-93 347.8 454 42.7
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 6.7e-93 345.1 456 41.7
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 3.3e-92 342.8 492 40.0
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 8.1e-91 338.2 452 42.3
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.1e-90 337.8 457 41.8
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.1e-90 337.8 464 41.2
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 3.1e-90 336.3 461 41.2
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.9e-88 329.7 478 40.8
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.1e-87 327.8 434 41.9
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 3.2e-87 326.2 447 41.2
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 1.8e-85 320.5 446 39.5
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 3.0e-85 319.7 464 40.3
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.5e-84 317.4 466 39.5
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 9.6e-84 314.7 446 39.5
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.1e-83 313.5 454 39.2
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.8e-82 310.5 451 38.6
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 2.4e-82 310.1 454 39.0
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 4.1e-82 309.3 404 41.3
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 1.2e-81 307.8 400 42.8
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 3.4e-81 306.2 400 42.2
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 4.5e-81 305.8 461 39.0
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.7e-80 303.9 474 38.0
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 8.4e-80 301.6 381 42.0
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 8.4e-80 301.6 400 41.2
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 8.4e-80 301.6 381 42.0
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 8.4e-80 301.6 467 39.0
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 1.4e-79 300.8 404 40.8
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 4.2e-79 299.3 458 38.0
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 7.2e-79 298.5 460 37.0
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 7.2e-79 298.5 459 37.7
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.6e-78 297.4 400 41.5
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 3.5e-78 296.2 486 38.1
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 1.0e-77 294.7 448 37.1
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 8.7e-77 291.6 430 38.6
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.5e-76 290.0 430 38.4
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 2.5e-76 290.0 405 39.8
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 2.4e-74 283.5 448 38.8
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 4.1e-74 282.7 474 36.3
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 2.1e-70 270.4 437 36.4
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.8e-69 267.3 417 37.4
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.3e-68 262.7 411 38.0
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 7.4e-68 261.9 435 35.6
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 4.8e-67 259.2 465 36.8
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 8.2e-67 258.5 429 36.6
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 1.0e-64 251.5 280 45.4
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.1e-63 248.1 412 37.6
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 3.2e-63 246.5 439 35.5
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 2.1e-62 243.8 351 40.7
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 4.7e-62 242.7 402 37.8
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 1.4e-61 241.1 375 38.1
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 8.8e-61 238.4 375 37.9
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 2.6e-60 236.9 330 39.7
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 3.5e-57 226.5 442 33.3
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 3.5e-57 226.5 263 43.3
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 2.2e-56 223.8 433 34.2
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 8.5e-56 221.9 211 51.2
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 1.5e-55 221.1 319 39.5
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 3.2e-55 219.9 446 31.4
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 7.2e-55 218.8 414 33.6
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 7.2e-55 218.8 457 31.5
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 6.7e-53 212.2 450 30.9
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 8.8e-45 185.3 408 32.1
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 8.8e-45 185.3 327 34.3
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.4e-42 177.9 279 38.7
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 3.0e-29 133.7 90 65.6
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.4e-26 122.9 94 57.4
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 1.6e-25 121.3 90 58.9
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 4.6e-25 119.8 332 28.6
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 1.2e-22 111.7 164 43.9
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 5.4e-18 96.3 141 39.0
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 4.3e-15 86.7 113 41.6
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 5.6e-15 86.3 55 61.8
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.1e-14 84.3 54 61.1
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 2.8e-14 84.0 432 22.0
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 2.9e-11 73.9 116 37.1
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 1.4e-10 71.6 50 60.0
SMO367G0912 Selaginella moellendorffii HOM05D007808 ORTHO05D009895 1.4e-10 71.6 270 24.1
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 2.5e-07 60.8 146 29.5


User provided reference genes

Program Settings