Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 0.0e+00 1468.0 783 100.0
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 0.0e+00 1406.3 797 95.0
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.4e-161 573.5 803 49.7
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 7.0e-153 545.4 825 48.0
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 5.2e-148 529.3 838 47.4
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 3.5e-144 516.5 825 47.2
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 5.9e-144 515.8 815 47.5
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 6.8e-140 502.3 834 45.7
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.5e-136 490.0 829 45.0
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 3.3e-134 483.4 814 45.6
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 9.8e-131 471.9 810 44.4
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.2e-130 470.7 796 45.5
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 3.5e-128 463.4 841 43.6
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 1.0e-127 461.8 834 42.9
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.7e-125 453.0 818 43.4
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 8.9e-124 448.7 467 59.5
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.0e-123 447.6 802 45.3
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.0e-123 447.6 814 43.0
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 7.5e-123 445.7 809 43.1
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 9.9e-123 445.3 834 42.0
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 6.4e-122 442.6 827 42.1
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 8.3e-122 442.2 669 47.4
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 8.3e-122 442.2 837 41.7
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.4e-121 439.5 804 45.3
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.6e-120 438.0 821 43.4
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 6.6e-119 432.6 815 43.1
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.1e-118 431.8 819 41.8
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 4.7e-117 426.4 833 42.0
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 6.2e-117 426.0 810 42.3
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 3.1e-116 423.7 834 42.0
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 1.2e-115 421.8 838 42.7
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 3.4e-115 420.2 483 55.1
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 6.4e-114 416.0 838 40.8
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 9.2e-113 412.1 687 44.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.7e-112 410.6 763 42.3
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 4.6e-112 409.8 825 40.1
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 7.8e-112 409.1 820 40.1
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.3e-111 407.5 826 41.3
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 2.3e-111 407.5 820 40.9
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 1.1e-110 405.2 819 39.9
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 1.5e-110 404.8 803 40.6
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 1.9e-110 404.4 830 40.6
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.3e-110 402.5 806 41.9
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 9.6e-110 402.1 811 40.1
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 1.4e-108 398.3 832 40.7
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 1.8e-108 397.9 828 39.0
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 3.1e-108 397.1 809 39.9
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 3.1e-108 397.1 819 40.4
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 9.0e-108 395.6 813 41.8
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 1.2e-107 395.2 821 40.7
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 3.2e-105 387.1 812 41.3
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 3.2e-105 387.1 808 41.8
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 5.4e-105 386.3 381 61.7
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 1.6e-104 384.8 828 39.4
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.1e-104 384.4 802 41.5
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 4.6e-104 383.3 834 38.6
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 1.3e-103 381.7 813 39.4
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 5.1e-103 379.8 823 40.1
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 1.5e-102 378.3 811 41.4
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 4.3e-102 376.7 830 39.9
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 2.1e-101 374.4 373 58.7
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.1e-101 374.4 807 40.4
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 4.8e-101 373.2 816 39.6
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 3.8e-98 363.6 905 36.5
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 4.9e-98 363.2 842 38.6
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 1.4e-97 361.7 822 39.7
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 3.2e-97 360.5 427 52.5
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 5.4e-97 359.8 813 38.7
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.6e-96 358.2 799 39.5
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 3.5e-96 357.1 844 39.2
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.3e-95 355.1 799 39.9
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 3.9e-95 353.6 814 37.7
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 3.9e-95 353.6 815 37.9
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 8.1e-93 345.9 820 38.5
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.8e-92 344.7 794 38.7
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 2.6e-91 340.9 821 38.0
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 4.5e-91 340.1 846 37.9
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 5.8e-91 339.7 624 42.8
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 5.8e-91 339.7 827 38.6
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 9.9e-91 339.0 796 37.3
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 1.3e-90 338.6 804 36.4
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 1.7e-90 338.2 847 37.0
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 8.4e-90 335.9 846 36.2
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 8.4e-90 335.9 812 37.6
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 2.1e-88 331.3 805 36.8
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 2.1e-88 331.3 783 36.1
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 6.0e-88 329.7 818 36.7
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 7.9e-88 329.3 842 36.9
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 1.0e-87 328.9 859 35.6
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 1.0e-87 328.9 811 37.6
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 5.1e-87 326.6 811 37.0
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 5.1e-87 326.6 458 48.9
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 6.7e-87 326.2 817 37.1
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 6.7e-87 326.2 820 37.3
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 1.5e-86 325.1 806 36.6
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 1.5e-86 325.1 823 37.3
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 2.1e-85 321.2 805 35.9
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 2.4e-84 317.8 523 44.6
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 6.9e-84 316.2 299 63.2
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 9.0e-84 315.8 546 41.8
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 2.0e-83 314.7 812 36.2
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.6e-83 314.3 1028 32.7
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 5.8e-83 313.2 811 36.0
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 2.2e-82 311.2 813 35.3
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 3.5e-80 303.9 812 35.7
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 6.0e-80 303.1 826 35.7
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 7.9e-80 302.8 590 40.2
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 5.1e-79 300.1 799 35.8
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 8.7e-79 299.3 816 37.1
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.1e-78 298.9 595 39.2
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 1.5e-78 298.5 800 35.5
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.9e-78 298.1 803 34.6
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 7.4e-78 296.2 839 35.3
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 1.3e-77 295.4 811 34.2
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 2.2e-77 294.7 700 38.7
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 4.8e-77 293.5 818 35.1
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 4.1e-76 290.4 538 41.6
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 9.0e-76 289.3 600 38.2
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 1.7e-74 285.0 510 42.2
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 5.0e-74 283.5 604 37.9
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.9e-73 281.6 513 41.9
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 7.2e-73 279.6 805 34.0
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 3.3e-70 270.8 531 40.7
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.7e-69 268.5 846 32.9
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 8.2e-69 266.2 572 37.1
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 1.4e-68 265.4 560 37.1
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 2.4e-68 264.6 776 34.1
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 5.3e-68 263.5 815 31.5
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 1.3e-66 258.8 554 36.6
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 2.9e-66 257.7 588 36.4
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 3.2e-65 254.2 563 37.5
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 2.1e-64 251.5 588 35.5
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 1.4e-57 228.8 664 36.1
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.5e-54 218.8 595 37.8
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 4.5e-51 207.2 351 43.3
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 7.2e-49 199.9 650 32.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.2e-48 199.1 404 38.4
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 4.0e-47 194.1 632 33.2
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 6.3e-45 186.8 424 35.1
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.6e-43 182.2 563 33.7
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.7e-42 178.7 419 34.4
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 2.3e-39 168.3 182 54.9
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 7.5e-38 163.3 424 33.7
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.3e-34 152.5 388 36.1
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 2.3e-34 151.8 351 36.2
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 5.0e-34 150.6 113 69.9
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 6.6e-26 123.6 436 29.1
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 2.5e-25 121.7 100 64.0
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.3e-25 120.9 92 71.7
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 8.0e-24 116.7 137 55.5
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 8.3e-21 106.7 178 48.3
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.7e-19 101.7 260 35.8
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-17 96.3 68 75.0
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.0e-16 90.1 66 71.2
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 8.0e-16 90.1 80 61.2
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 2.3e-15 88.6 143 42.0
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.2e-15 87.4 71 69.0
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.2e-14 86.3 71 69.0
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.2e-14 86.3 66 71.2
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.4e-14 84.3 63 74.6
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 4.4e-14 84.3 62 67.7
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 1.7e-13 82.4 55 70.9
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.4e-13 80.5 56 80.4
Gorai.010G154900 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.1e-12 77.8 56 76.8
Gohir.D06G132966 Gossypium hirsutum HOM05D003628 ORTHO05D004253 9.2e-12 76.6 55 76.4
Gohir.D08G229150 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-11 76.3 56 75.0
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 1.6e-11 75.9 553 27.3
Gohir.D02G158575 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.7e-11 75.1 65 64.6
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.7e-10 72.4 50 78.0
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.1e-10 70.9 50 76.0
Gohir.D11G243366 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.6e-09 67.4 63 65.1
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 9.5e-09 66.6 76 53.9
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 1.6e-08 65.9 51 66.7
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 2.1e-08 65.5 43 74.4
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 4.0e-07 61.2 483 25.9
Cre12.g514550 Chlamydomonas reinhardtii HOM05D003628 ORTHO05D004253 1.5e-06 59.3 95 37.9


User provided reference genes

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