Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-31 139.4 94 100.0
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-31 139.4 94 78.7
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-31 137.1 94 97.9
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-31 137.1 94 97.9
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-20 101.3 89 83.1
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-20 101.3 89 83.1
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.6e-19 97.8 89 80.9
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.8e-18 95.9 93 78.5
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.6e-16 89.4 85 57.6
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.7e-16 88.2 86 67.4
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.7e-16 88.2 86 67.4
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.4e-15 86.3 85 52.9
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.4e-15 85.5 85 55.3
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 4.1e-15 84.7 86 65.1
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 6.9e-15 84.0 82 50.0
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 6.9e-15 84.0 82 50.0
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 6.9e-15 84.0 86 53.5
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 9.0e-15 83.6 86 52.3
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.0e-14 82.4 85 51.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.4e-14 81.6 82 48.8
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 5.9e-14 80.9 85 50.6
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 5.9e-14 80.9 84 48.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.3e-13 79.7 85 48.2
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.3e-13 79.7 85 48.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.2e-13 79.0 86 48.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 2.2e-13 79.0 82 53.7
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 3.8e-13 78.2 83 47.0
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 5.0e-13 77.8 88 47.7
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 2.5e-12 75.5 84 67.9
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 3.2e-12 75.1 85 49.4
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 3.2e-12 75.1 83 47.0
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.2e-12 74.7 89 58.4
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 5.5e-12 74.3 83 45.8
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 5.5e-12 74.3 92 41.3
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 7.2e-12 73.9 91 56.0
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 9.4e-12 73.6 89 51.7
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.6e-11 72.8 83 43.4
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-11 72.4 88 46.6
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 3.6e-11 71.6 85 62.4
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 3.6e-11 71.6 85 62.4
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.6e-11 71.2 87 43.7
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 6.1e-11 70.9 84 44.0
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 7.9e-11 70.5 84 48.8
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 7.9e-11 70.5 88 61.4
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.0e-10 70.1 84 44.0
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.4e-10 69.7 86 68.6
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.4e-10 69.7 84 45.2
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 1.8e-10 69.3 83 63.9
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 2.3e-10 68.9 83 66.3
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 49.5
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 53.3
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 53.3
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 53.3
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 5.1e-10 67.8 85 48.2
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 6.7e-10 67.4 107 48.6
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 6.7e-10 67.4 83 61.4
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 6.7e-10 67.4 93 39.8
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-09 66.6 108 53.7
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 1.1e-09 66.6 108 53.7
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 1.1e-09 66.6 84 41.7
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 1.5e-09 66.2 85 47.1
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.5e-09 66.2 92 42.4
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.5e-09 66.2 99 41.4
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 2.0e-09 65.9 70 47.1
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 2.5e-09 65.5 79 62.0
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 5.7e-09 64.3 85 44.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 5.7e-09 64.3 85 44.7
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 5.7e-09 64.3 93 43.0
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.3e-08 63.2 82 64.6
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.3e-08 63.2 82 64.6
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.3e-08 63.2 82 64.6
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.3e-08 63.2 82 64.6
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 1.7e-08 62.8 93 52.7
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.8e-08 62.0 80 43.8
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 4.8e-08 61.2 132 46.2
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 6.3e-08 60.8 107 54.2
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 8.2e-08 60.5 70 58.6
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 8.2e-08 60.5 82 40.2
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 1.1e-07 60.1 63 50.8
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.1e-07 60.1 80 42.5
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.8e-07 59.3 70 57.1
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.8e-07 59.3 80 41.2
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 2.4e-07 58.9 107 49.5
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 2.4e-07 58.9 82 40.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 4.1e-07 58.2 75 48.0
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 5.3e-07 57.8 107 53.3
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 6.9e-07 57.4 70 40.0
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 9.1e-07 57.0 118 42.4
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 1.5e-06 56.2 107 46.7
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 1.5e-06 56.2 107 46.7
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 53.7
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 53.7
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 53.7
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 107 52.3
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 2.6e-06 55.5 80 63.8
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 3.4e-06 55.1 107 49.5
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 3.4e-06 55.1 135 38.5
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 5.9e-06 54.3 37 62.2
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 5.9e-06 54.3 34 67.6
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 5.9e-06 54.3 96 58.3


User provided reference genes

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