Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 5.1e-85 317.8 168 100.0
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 1.9e-39 166.4 97 93.8
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.8e-35 152.5 175 52.0
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.1e-26 124.0 172 47.1
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 3.8e-24 115.5 147 49.7
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 5.2e-21 105.1 145 46.9
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 1.3e-19 100.5 169 41.4
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 5.4e-18 95.1 92 53.3
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 7.7e-17 91.3 162 41.4
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 6.6e-16 88.2 153 39.2
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 8.6e-16 87.8 143 42.0
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 4.3e-15 85.5 161 40.4
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.2e-14 84.0 162 40.7
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 2.8e-14 82.8 145 38.6
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 2.8e-14 82.8 170 37.6
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.0e-13 80.9 175 37.7
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.0e-13 80.9 137 41.6
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 1.4e-13 80.5 139 41.0
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.4e-13 80.5 172 41.3
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 4.0e-13 79.0 165 35.8
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 5.2e-13 78.6 162 38.3
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 8.9e-13 77.8 149 40.3
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 3.4e-12 75.9 119 41.2
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 4.4e-12 75.5 136 38.2
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 4.4e-12 75.5 140 40.0
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 5.7e-12 75.1 155 37.4
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 5.7e-12 75.1 147 42.2
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 1.3e-11 73.9 153 37.9
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 1.4e-10 70.5 176 33.5
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 2.4e-10 69.7 136 33.8
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.2e-10 69.3 139 38.1
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 4.1e-10 68.9 170 37.1
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 4.1e-10 68.9 170 37.1
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 5.4e-10 68.6 146 34.2
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 9.2e-10 67.8 139 36.0
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 1.2e-09 67.4 119 39.5
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 1.6e-09 67.0 140 37.1
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.7e-09 66.2 123 38.2
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 4.6e-09 65.5 140 37.1
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 7.8e-09 64.7 106 43.4
Sp7g20010 Schrenkiella parvula HOM05D012000 ORTHO05D013959 1.0e-08 64.3 153 32.7
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.3e-08 63.9 119 37.8
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 1.3e-08 63.9 118 36.4
BcaB03g11715 Brassica carinata HOM05D012000 ORTHO05D013959 2.3e-08 63.2 82 47.6
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 3.0e-08 62.8 163 35.0
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 3.0e-08 62.8 140 35.7
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 8.6e-08 61.2 124 34.7
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 1.1e-07 60.8 86 47.7
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 1.5e-07 60.5 149 30.2
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 1.9e-07 60.1 162 32.1
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 1.9e-07 60.1 93 41.9
AL7G32040 Arabidopsis lyrata HOM05D012000 ORTHO05D013959 4.3e-07 58.9 128 36.7
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 4.3e-07 58.9 113 37.2
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 4.3e-07 58.9 106 40.6
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 4.3e-07 58.9 116 35.3
Carub.0007s1951 Capsella rubella HOM05D012000 ORTHO05D013959 5.6e-07 58.5 115 36.5
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.6e-07 58.5 128 37.5
Lj5g0016645 Lotus japonicus HOM05D016547 ORTHO05D009575 5.6e-07 58.5 67 49.3
A08p15490 Brassica napus HOM05D012000 ORTHO05D013959 7.3e-07 58.2 82 45.1
Thhalv10026480m.g Eutrema salsugineum HOM05D012000 ORTHO05D013959 7.3e-07 58.2 82 42.7
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 7.3e-07 58.2 158 30.4
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 9.5e-07 57.8 148 35.8
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 9.5e-07 57.8 86 43.0
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.6e-06 57.0 88 44.3
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 2.1e-06 56.6 106 39.6
AT4G21865 Arabidopsis thaliana HOM05D012000 ORTHO05D013959 2.8e-06 56.2 96 40.6
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 2.8e-06 56.2 100 40.0
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.6e-06 55.8 122 36.1
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 4.7e-06 55.5 89 34.8
BraA08t33526Z Brassica rapa HOM05D012000 ORTHO05D013959 6.2e-06 55.1 130 37.7
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 6.2e-06 55.1 114 38.6
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 6.2e-06 55.1 90 41.1
Psat6g107200 Pisum sativum HOM05D016547 ORTHO05D009575 8.0e-06 54.7 104 36.5


User provided reference genes

Program Settings