Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 0.0e+00 1082.4 556 100.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 2.0e-295 1018.5 556 94.2
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 5.8e-186 654.8 561 62.4
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 5.4e-184 648.3 561 62.7
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 4.3e-165 585.5 560 57.7
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 2.1e-164 583.2 541 59.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 4.8e-156 555.4 555 55.3
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 8.2e-156 554.7 553 54.2
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 5.5e-152 542.0 553 54.6
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 5.1e-150 535.4 548 53.5
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 8.2e-148 528.1 560 53.2
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 3.1e-147 526.2 499 57.1
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 6.9e-147 525.0 557 52.8
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.2e-146 524.2 542 54.2
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 3.2e-144 516.2 551 52.6
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 7.2e-144 515.0 567 52.9
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 9.4e-144 514.6 581 50.4
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 9.4e-144 514.6 533 53.8
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 2.1e-143 513.5 559 53.0
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.1e-143 513.5 559 52.4
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.4e-142 510.8 561 53.1
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 3.0e-142 509.6 559 52.6
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.7e-142 508.4 549 51.4
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.6e-141 506.5 532 51.5
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 4.4e-141 505.8 509 55.8
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 5.7e-141 505.4 564 52.8
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.3e-140 501.9 562 53.2
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 6.3e-140 501.9 551 52.6
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 1.4e-139 500.7 545 52.5
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 5.3e-139 498.8 548 52.2
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.2e-138 497.7 542 52.6
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.2e-138 497.7 554 52.5
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.6e-138 497.3 542 52.8
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.6e-138 496.5 542 52.4
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.0e-137 494.6 581 49.7
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 5.0e-137 492.3 553 48.8
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 5.0e-137 492.3 509 54.4
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.5e-136 490.7 545 50.6
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.5e-136 490.0 551 50.6
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.2e-136 489.6 556 49.5
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.6e-135 487.3 578 50.5
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 6.1e-135 485.3 547 50.8
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 6.1e-135 485.3 547 50.8
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 1.8e-134 483.8 556 49.6
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 6.7e-134 481.9 544 49.8
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 2.2e-132 476.9 556 49.8
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.2e-132 476.9 545 49.5
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.8e-131 473.8 539 50.6
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 2.4e-131 473.4 539 51.0
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.1e-131 473.0 555 48.3
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 4.5e-130 469.2 555 49.7
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 5.9e-130 468.8 553 50.1
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 5.9e-130 468.8 552 48.4
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 6.5e-129 465.3 513 52.0
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 7.2e-128 461.8 496 53.8
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.2e-127 461.1 554 48.6
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 3.6e-127 459.5 555 47.4
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.4e-126 457.6 557 49.4
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 5.2e-126 455.7 559 47.6
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 8.8e-126 454.9 558 47.3
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.6e-125 453.4 540 49.1
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 4.4e-125 452.6 551 47.2
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 5.7e-125 452.2 540 48.9
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 6.3e-124 448.7 579 45.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 8.3e-124 448.4 542 48.5
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 4.1e-123 446.0 507 51.9
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.0e-118 431.4 559 44.7
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 8.8e-118 428.3 476 53.2
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 4.4e-117 426.0 369 61.0
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.4e-115 421.0 391 57.0
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.2e-114 417.9 554 44.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 1.5e-109 401.0 546 45.6
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 4.6e-106 389.4 452 47.6
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.4e-101 372.9 561 40.5
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.3e-100 371.3 558 40.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.2e-91 340.1 554 37.5
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.1e-88 331.6 370 52.4
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 5.6e-88 329.3 375 51.5
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.6e-87 327.8 295 58.0
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 8.1e-87 325.5 385 46.5
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 4.1e-83 313.2 527 37.8
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.7e-81 307.8 367 51.2
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.9e-72 277.7 374 46.8
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.6e-69 267.3 565 32.7
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 8.7e-49 199.1 169 59.8
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 2.2e-39 167.9 192 51.6
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.7e-34 151.0 195 43.1
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 1.4e-30 138.7 155 49.7
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 4.8e-23 113.6 118 50.8
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 9.4e-19 99.4 128 49.2
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 8.0e-10 69.7 71 46.5
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 9.8e-08 62.8 171 28.1


User provided reference genes

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