Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 7.0e-108 394.0 210 100.0
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 3.8e-106 388.3 210 98.1
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.0e-66 257.3 208 70.7
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 4.7e-64 248.4 210 65.7
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 3.2e-60 235.7 208 66.3
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 1.6e-59 233.4 206 64.1
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.3e-58 230.3 207 62.3
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 1.1e-57 227.3 214 61.7
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 2.5e-57 226.1 211 62.1
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 4.3e-57 225.3 215 62.3
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 5.6e-57 224.9 211 62.1
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 1.3e-56 223.8 212 61.3
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.6e-56 223.4 228 56.6
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.6e-56 223.4 211 63.0
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 2.8e-56 222.6 212 63.2
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 6.2e-56 221.5 214 62.1
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 6.2e-56 221.5 227 59.9
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.1e-55 220.7 208 63.0
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 1.8e-55 219.9 214 59.8
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 5.3e-55 218.4 208 62.0
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 1.5e-54 216.9 220 56.8
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 2.6e-54 216.1 207 62.3
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 3.4e-54 215.7 208 61.5
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 3.4e-54 215.7 211 61.1
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 3.4e-54 215.7 210 61.9
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 7.6e-54 214.5 209 59.8
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 9.9e-54 214.2 229 55.9
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.3e-53 213.8 213 59.2
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.7e-53 213.4 213 60.1
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.2e-53 213.0 229 54.6
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 2.9e-53 212.6 215 60.9
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 4.9e-53 211.8 205 59.5
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 6.4e-53 211.5 215 57.7
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 1.4e-52 210.3 215 59.5
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.9e-52 209.9 213 57.7
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 2.4e-52 209.5 211 58.8
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 3.2e-52 209.1 212 60.8
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 4.2e-52 208.8 229 54.1
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.5e-51 205.7 205 60.5
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 4.6e-51 205.3 206 58.3
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 7.8e-51 204.5 217 57.1
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 7.8e-51 204.5 223 57.8
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.3e-50 203.8 205 60.0
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.7e-50 203.4 204 60.3
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 2.3e-50 203.0 217 55.3
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.3e-50 203.0 205 60.0
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.3e-50 203.0 216 58.3
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 3.9e-50 202.2 212 56.1
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 3.9e-50 202.2 214 58.9
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 6.6e-50 201.4 203 61.1
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 8.7e-50 201.1 210 59.0
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 1.1e-49 200.7 213 59.2
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.5e-49 199.5 213 56.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 3.3e-49 199.1 213 56.3
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 4.3e-49 198.7 218 58.7
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 4.3e-49 198.7 212 58.0
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 5.6e-49 198.4 149 68.5
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 7.3e-49 198.0 213 56.3
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 9.6e-49 197.6 210 58.6
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.8e-48 196.1 213 55.9
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.8e-48 195.3 226 55.8
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.1e-47 194.1 213 56.3
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.4e-47 193.7 213 56.3
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 2.4e-47 193.0 212 55.2
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 3.1e-47 192.6 208 56.7
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 4.0e-47 192.2 214 54.7
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 4.0e-47 192.2 207 56.0
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 6.9e-47 191.4 216 55.1
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 6.9e-47 191.4 201 56.7
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 9.0e-47 191.0 209 54.5
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.5e-46 188.7 223 54.3
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 4.5e-46 188.7 229 52.8
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 5.8e-46 188.3 200 55.5
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.6e-46 188.0 226 54.4
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 9.9e-46 187.6 206 53.9
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.9e-45 186.0 207 54.6
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 3.2e-44 182.6 208 54.3
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 3.2e-44 182.6 207 51.2
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 4.2e-44 182.2 221 53.4
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 7.1e-44 181.4 217 53.9
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 7.9e-43 177.9 119 73.9
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.3e-42 177.2 214 54.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 5.1e-42 175.3 201 55.7
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 6.7e-42 174.9 214 54.7
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 5.6e-41 171.8 214 54.2
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 5.6e-41 171.8 214 54.2
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 1.6e-40 170.2 208 51.9
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 1.6e-40 170.2 208 51.9
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 3.7e-40 169.1 212 53.3
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 3.7e-40 169.1 212 53.3
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 3.7e-40 169.1 207 49.3
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 4.0e-39 165.6 128 68.0
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 5.3e-39 165.2 191 52.4
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 9.0e-39 164.5 207 49.3
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 3.4e-38 162.5 206 51.0
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 3.4e-38 162.5 122 67.2
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 5.8e-38 161.8 117 69.2
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.4e-36 157.1 174 54.0
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.0e-34 151.0 127 62.2
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.1e-31 139.4 204 46.1
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 2.5e-28 129.8 216 44.4
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 2.1e-27 126.7 89 69.7
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.3e-26 124.0 86 70.9
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 4.3e-25 119.0 82 70.7
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.2e-24 116.7 186 44.6
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.8e-24 116.3 177 44.6
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.7e-24 115.9 223 41.7
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.4e-23 113.2 205 42.9
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 6.9e-23 111.7 205 39.0
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 1.2e-22 110.9 199 40.7
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 7.4e-17 91.7 132 40.9
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.4e-15 87.4 156 46.2
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.9e-14 82.0 167 37.7
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 9.4e-12 74.7 130 46.2
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 1.0e-10 71.2 215 36.3
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.8e-10 70.5 208 32.7
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 3.0e-10 69.7 145 40.0
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 5.1e-10 68.9 44 68.2
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.1e-10 68.9 56 60.7
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 3.3e-09 66.2 45 68.9
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 9.7e-09 64.7 46 69.6
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 1.2e-06 57.8 158 29.1
Cre11.g477250 Chlamydomonas reinhardtii HOM05D006141 ORTHO05D007670 7.7e-06 55.1 96 36.5


User provided reference genes

Program Settings