Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 3.4e-105 385.2 222 100.0
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 4.1e-98 361.7 219 95.9
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 3.3e-47 192.6 192 56.8
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.8e-45 186.8 199 57.8
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.7e-43 180.3 189 54.0
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 7.0e-42 174.9 189 54.0
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.7e-41 172.9 188 56.9
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 6.0e-41 171.8 189 55.0
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 2.8e-38 162.9 181 52.5
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 6.2e-38 161.8 181 54.1
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 6.2e-38 161.8 188 54.3
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.1e-37 161.0 177 53.7
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.1e-37 161.0 187 52.4
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 3.1e-37 159.5 180 51.1
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 3.1e-37 159.5 188 53.7
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 6.8e-37 158.3 177 53.1
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.0e-36 156.8 185 51.9
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.6e-36 156.4 191 46.1
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 4.4e-36 155.6 197 48.2
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.4e-36 155.6 190 52.1
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 4.4e-36 155.6 186 48.9
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 7.5e-36 154.8 190 52.1
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.7e-35 153.7 194 46.9
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 3.7e-35 152.5 192 51.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.9e-35 152.1 196 49.5
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 8.3e-35 151.4 191 49.7
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 8.3e-35 151.4 190 50.0
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.1e-34 151.0 194 49.5
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 1.9e-34 150.2 190 50.5
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.4e-34 149.8 191 47.1
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 4.1e-34 149.1 193 49.2
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 4.1e-34 149.1 181 51.4
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 7.1e-34 148.3 184 49.5
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 9.2e-34 147.9 191 49.2
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 2.1e-33 146.7 188 51.6
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.7e-33 146.4 198 47.0
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 4.6e-33 145.6 187 47.6
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 6.0e-33 145.2 202 47.0
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.8e-33 144.8 195 47.7
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.0e-32 144.4 197 46.2
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.7e-32 143.7 184 50.5
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.7e-32 143.7 188 49.5
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.3e-32 143.3 201 43.8
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.3e-32 143.3 191 45.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 2.3e-32 143.3 188 48.9
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 3.0e-32 142.9 193 46.6
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 3.0e-32 142.9 203 44.8
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 5.1e-32 142.1 186 50.0
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.6e-32 141.7 196 47.4
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.1e-31 141.0 194 47.9
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 1.9e-31 140.2 190 47.9
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 2.5e-31 139.8 184 47.8
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.3e-31 139.4 191 47.6
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 3.3e-31 139.4 194 43.3
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 4.3e-31 139.0 182 48.9
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.6e-31 138.7 191 46.6
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.6e-31 138.7 194 47.9
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.2e-30 137.5 191 47.1
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.2e-30 137.5 189 45.0
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 1.6e-30 137.1 195 44.6
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.1e-30 136.7 187 47.6
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 2.1e-30 136.7 185 46.5
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.1e-30 136.7 192 44.8
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 2.8e-30 136.3 187 46.5
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 4.7e-30 135.6 182 48.4
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.7e-30 135.6 192 46.9
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.7e-30 135.6 192 46.9
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.7e-30 135.6 192 46.9
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 6.2e-30 135.2 176 48.9
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 6.2e-30 135.2 177 43.5
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 8.1e-30 134.8 185 47.0
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 8.1e-30 134.8 185 47.0
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 8.1e-30 134.8 191 46.1
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-29 134.4 192 45.8
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-29 133.7 189 46.6
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.8e-29 133.7 189 45.5
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.8e-29 133.7 185 45.4
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 2.3e-29 133.3 183 48.6
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.3e-29 133.3 186 45.7
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 3.1e-29 132.9 195 42.1
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 4.0e-29 132.5 222 44.6
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.9e-29 131.3 189 45.0
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 1.2e-28 131.0 179 46.4
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.2e-28 131.0 186 45.7
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 1.2e-28 131.0 180 46.1
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.5e-28 130.6 180 47.8
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 2.0e-28 130.2 186 45.2
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 2.6e-28 129.8 184 45.7
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 2.6e-28 129.8 172 45.9
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 3.4e-28 129.4 186 46.8
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 3.4e-28 129.4 198 45.5
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 3.4e-28 129.4 182 46.2
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 3.4e-28 129.4 188 45.7
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 4.4e-28 129.0 185 48.1
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 5.8e-28 128.6 181 45.9
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 7.6e-28 128.3 186 45.7
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 7.6e-28 128.3 186 45.2
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.6e-28 128.3 188 45.7
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 7.6e-28 128.3 186 42.5
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 9.9e-28 127.9 186 45.2
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 9.9e-28 127.9 186 45.2
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 9.9e-28 127.9 186 45.2
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.3e-27 127.5 186 43.5
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.7e-27 127.1 213 45.5
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 1.7e-27 127.1 185 42.7
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 2.9e-27 126.3 187 43.3
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 3.8e-27 125.9 172 47.1
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 4.9e-27 125.6 184 44.6
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 4.9e-27 125.6 192 45.3
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 6.4e-27 125.2 181 43.1
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 8.4e-27 124.8 185 43.8
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-26 124.0 187 48.7
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 2.4e-26 123.2 190 42.1
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.4e-26 123.2 178 46.1
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 3.2e-26 122.9 171 45.0
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 3.2e-26 122.9 172 43.6
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 4.1e-26 122.5 185 44.9
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 4.1e-26 122.5 186 45.7
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 4.1e-26 122.5 186 45.7
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 9.2e-26 121.3 187 46.0
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 9.2e-26 121.3 187 46.0
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.2e-25 120.9 190 42.1
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 1.6e-25 120.6 184 44.0
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 3.5e-25 119.4 176 42.0
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.0e-24 117.9 183 42.1
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.0e-24 117.9 182 42.3
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.3e-24 117.5 179 48.0
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 3.0e-24 116.3 189 45.5
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-24 115.9 186 43.0
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.1e-24 115.5 183 42.1
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 6.6e-24 115.2 190 45.8
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 8.6e-24 114.8 197 39.6
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 1.1e-23 114.4 170 46.5
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.1e-23 114.4 179 43.6
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 3.3e-23 112.8 186 41.4
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 4.3e-23 112.5 180 45.6
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-23 112.1 197 40.6
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 9.6e-23 111.3 183 38.8
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-22 110.5 186 40.9
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.6e-22 109.4 175 44.6
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 6.2e-22 108.6 217 38.7
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.4e-21 107.5 174 42.0
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 3.1e-21 106.3 184 39.1
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 3.4e-20 102.8 202 37.1
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 8.4e-19 98.2 175 40.6
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-18 97.8 161 40.4
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 3.2e-18 96.3 131 45.8
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.2e-17 94.4 180 39.4
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 3.5e-17 92.8 175 39.4
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 4.6e-17 92.4 126 46.8
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 7.8e-17 91.7 215 34.9
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 1.3e-16 90.9 212 35.4
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.7e-16 90.5 191 34.0
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.6e-16 88.6 181 35.4
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 1.9e-15 87.0 176 38.6
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.6e-15 85.5 154 43.5
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 7.3e-15 85.1 90 52.2
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 3.6e-14 82.8 283 29.3
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.2e-14 82.0 184 38.0
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.4e-13 80.1 153 40.5
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.4e-13 80.1 136 39.0
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 4.0e-13 79.3 178 38.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 6.9e-13 78.6 176 36.9
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 2.0e-12 77.0 212 32.5
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.6e-09 67.4 202 29.2
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-09 65.9 105 38.1
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.0e-09 65.5 104 37.5
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-08 63.2 97 39.2
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 8.7e-08 61.6 196 27.0
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 8.7e-08 61.6 123 37.4
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.3e-07 59.7 102 39.2
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.3e-07 59.3 97 37.1
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 5.6e-07 58.9 144 31.2
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 9.6e-07 58.2 169 33.1
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 4.8e-06 55.8 198 26.8


User provided reference genes

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