Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.1e-184 649.8 324 100.0
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.9e-177 625.2 324 95.4
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 2.0e-125 453.0 325 68.6
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.4e-125 451.8 325 67.7
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 5.7e-125 451.4 282 74.5
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 2.0e-122 443.0 304 69.1
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.0e-121 440.7 305 68.9
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 9.4e-120 434.1 300 68.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.6e-119 433.3 327 65.7
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 6.1e-119 431.4 301 69.4
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 1.4e-118 430.3 299 66.9
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 1.8e-118 429.9 305 66.6
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 2.3e-118 429.5 302 68.2
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.1e-117 427.2 307 67.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 3.3e-117 425.6 301 68.1
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.3e-117 425.6 323 64.1
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 4.4e-117 425.2 294 69.7
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 8.2e-116 421.0 343 60.1
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 1.8e-115 419.9 316 62.0
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 4.1e-115 418.7 304 63.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 7.0e-115 417.9 326 62.9
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.6e-114 416.8 298 65.8
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.7e-113 413.3 324 63.0
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 2.9e-113 412.5 301 62.8
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 3.8e-113 412.1 301 62.5
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 8.5e-113 411.0 315 62.5
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 9.4e-112 407.5 305 64.6
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 3.6e-111 405.6 301 65.4
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 3.6e-111 405.6 301 61.5
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.7e-111 405.2 306 66.3
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 8.8e-110 401.0 292 64.4
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 7.5e-109 397.9 310 61.0
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 7.5e-109 397.9 323 60.4
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 9.7e-109 397.5 300 62.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.3e-108 397.1 287 64.5
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.2e-108 396.4 304 62.8
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 6.3e-108 394.8 304 62.2
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 2.4e-107 392.9 314 61.5
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 3.1e-107 392.5 313 58.8
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 5.3e-107 391.7 303 61.7
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 7.0e-107 391.3 298 62.1
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 7.7e-106 387.9 299 60.9
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 7.7e-106 387.9 303 61.7
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.0e-105 387.5 308 61.0
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.7e-105 386.7 327 57.5
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.2e-105 386.3 289 61.9
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 5.0e-105 385.2 298 61.7
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 6.5e-105 384.8 328 57.3
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.5e-104 382.9 326 58.6
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 4.2e-104 382.1 327 57.8
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 9.4e-104 380.9 299 60.2
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.6e-103 380.2 327 57.2
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.6e-103 380.2 294 58.2
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 2.7e-103 379.4 298 62.1
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 3.6e-103 379.0 299 61.5
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 6.1e-103 378.3 300 60.0
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.8e-102 374.4 268 65.3
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.3e-100 370.5 287 62.7
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 4.8e-100 368.6 320 56.9
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 4.8e-100 368.6 298 60.1
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 6.3e-100 368.2 296 60.1
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 4.1e-99 365.5 320 56.2
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 7.0e-99 364.8 320 56.6
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 1.2e-98 364.0 269 62.5
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 4.5e-98 362.1 283 59.7
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 6.6e-97 358.2 321 53.0
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 2.1e-95 353.2 319 55.2
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 5.2e-94 348.6 354 51.4
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 6.8e-94 348.2 248 66.5
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 2.6e-93 346.3 319 54.5
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 4.4e-93 345.5 326 52.1
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 9.8e-93 344.4 298 54.4
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 4.9e-92 342.0 256 66.8
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 5.9e-90 335.1 325 53.5
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.7e-89 333.6 315 54.0
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 4.9e-84 315.5 327 49.5
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.1e-80 304.3 300 54.0
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 5.6e-80 302.0 203 69.5
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 2.0e-77 293.5 205 66.3
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 6.4e-76 288.5 211 64.9
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 7.1e-75 285.0 270 57.0
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.0e-73 281.2 318 42.1
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 3.1e-70 269.6 208 59.1
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 3.1e-70 269.6 213 58.2
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 2.0e-69 266.9 333 47.7
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.7e-68 263.8 256 55.1
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.9e-68 263.1 205 60.0
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 5.4e-67 258.8 241 54.8
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 5.3e-54 215.7 292 38.4
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.7e-52 210.7 180 62.2
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 2.7e-50 203.4 292 39.7
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 4.6e-50 202.6 283 42.8
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 2.8e-47 193.4 122 72.1
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 3.1e-46 189.9 299 38.5
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 9.3e-43 178.3 212 41.5
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.5e-40 170.2 127 56.7
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 7.6e-37 158.7 295 32.9
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 7.6e-37 158.7 110 69.1
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 9.3e-35 151.8 142 54.2
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.7e-33 145.2 111 63.1
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 1.6e-31 141.0 96 63.5
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.8e-30 137.5 96 64.6
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.3e-28 131.3 91 62.6
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 7.1e-27 125.6 80 66.2
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 1.5e-24 117.9 180 40.6
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 2.5e-24 117.1 79 67.1
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.3e-23 114.8 155 36.1
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.3e-23 112.5 89 65.2
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 8.2e-23 112.1 293 28.3
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.1e-22 111.7 89 65.2
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 6.1e-18 95.9 86 53.5
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 1.8e-17 94.4 63 65.1
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 3.2e-11 73.6 135 34.8
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.1e-08 65.1 154 31.8
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.1e-08 65.1 154 31.8
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.6e-08 63.9 154 31.8
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.7e-07 60.1 40 72.5
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.8e-06 57.8 45 62.2
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 4.1e-06 56.6 38 73.7


User provided reference genes

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