Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 1.8e-44 182.2 92 100.0
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 1.8e-44 182.2 92 100.0
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.1e-33 146.4 92 78.3
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 1.5e-33 146.0 88 77.3
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 5.5e-33 144.1 89 77.5
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 7.2e-33 143.7 88 78.4
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 7.2e-33 143.7 88 78.4
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 7.2e-33 143.7 88 78.4
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 9.4e-33 143.3 88 78.4
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 9.4e-33 143.3 88 77.3
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 2.1e-32 142.1 88 77.3
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 2.7e-32 141.7 92 75.0
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 3.6e-32 141.4 88 77.3
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 4.7e-32 141.0 92 73.9
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 4.7e-32 141.0 89 74.2
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 4.7e-32 141.0 92 73.9
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 6.1e-32 140.6 92 72.8
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 6.1e-32 140.6 92 73.9
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 8.0e-32 140.2 92 72.8
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 1.0e-31 139.8 92 72.8
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.4e-31 139.4 92 75.0
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 72.8
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 71.7
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 71.7
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 71.7
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 1.8e-31 139.0 88 75.0
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 2.3e-31 138.7 88 75.0
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 2.3e-31 138.7 92 71.7
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 3.0e-31 138.3 88 76.1
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 3.0e-31 138.3 88 75.0
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 3.0e-31 138.3 88 75.0
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 3.0e-31 138.3 88 75.0
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 3.0e-31 138.3 88 72.7
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 3.0e-31 138.3 92 71.7
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 4.0e-31 137.9 92 72.8
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 5.2e-31 137.5 90 72.2
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 6.7e-31 137.1 88 73.9
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 6.7e-31 137.1 92 71.7
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.7e-31 137.1 92 72.8
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 6.7e-31 137.1 88 72.7
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.2e-30 136.3 88 73.9
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.2e-30 136.3 92 70.7
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 1.5e-30 136.0 88 72.7
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.5e-30 136.0 89 74.2
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 2.0e-30 135.6 92 70.7
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 2.6e-30 135.2 92 69.6
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 2.6e-30 135.2 92 71.7
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 2.6e-30 135.2 88 75.0
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 2.6e-30 135.2 88 75.0
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 3.3e-30 134.8 92 71.7
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 3.3e-30 134.8 92 71.7
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.4e-30 134.4 92 72.8
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 4.4e-30 134.4 92 70.7
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 5.7e-30 134.0 87 75.9
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 7.5e-30 133.7 88 72.7
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 9.7e-30 133.3 92 72.8
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 9.7e-30 133.3 88 73.9
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.3e-29 132.9 92 69.6
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 1.3e-29 132.9 88 75.0
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.7e-29 132.5 91 70.3
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 1.7e-29 132.5 88 70.5
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 1.7e-29 132.5 88 73.9
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 2.2e-29 132.1 89 70.8
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 2.8e-29 131.7 88 70.5
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.7e-29 131.3 91 69.2
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.7e-29 131.3 91 69.2
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 3.7e-29 131.3 86 74.4
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 3.7e-29 131.3 86 70.9
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 4.8e-29 131.0 88 73.9
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 6.3e-29 130.6 92 68.5
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 6.3e-29 130.6 92 67.4
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 8.2e-29 130.2 92 68.5
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 8.2e-29 130.2 88 70.5
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 8.2e-29 130.2 88 68.2
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.4e-28 129.4 92 64.1
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 1.8e-28 129.0 92 67.4
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 1.8e-28 129.0 92 67.4
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 1.8e-28 129.0 92 67.4
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 4.1e-28 127.9 92 66.3
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 4.1e-28 127.9 92 66.3
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 4.1e-28 127.9 92 66.3
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 4.1e-28 127.9 92 66.3
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 7.0e-28 127.1 84 71.4
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 9.1e-28 126.7 92 65.2
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 9.1e-28 126.7 90 67.8
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.2e-27 126.3 92 67.4
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 1.6e-27 125.9 92 65.2
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 1.6e-27 125.9 92 65.2
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.6e-27 125.9 92 65.2
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 1.6e-27 125.9 92 65.2
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.6e-27 125.9 92 65.2
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.0e-27 125.6 92 65.2
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.0e-27 125.6 92 65.2
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.0e-27 125.6 92 65.2
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.0e-27 125.6 84 70.2
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 3.5e-27 124.8 89 68.5
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 6.5e-26 120.6 92 63.0
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 6.5e-26 120.6 92 63.0
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 2.5e-25 118.6 135 49.6
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 3.6e-24 114.8 82 69.5
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 6.1e-24 114.0 119 52.9
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 8.0e-24 113.6 92 64.1
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 2.0e-22 109.0 144 45.8
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.7e-22 107.5 120 49.2
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 4.8e-21 104.4 73 67.1
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 1.4e-20 102.8 65 73.8
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 1.4e-20 102.8 65 72.3
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 2.4e-20 102.1 65 73.8
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 3.1e-20 101.7 65 72.3
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.2e-19 99.8 91 58.2
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 1.2e-19 99.8 65 75.4
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 8.5e-18 93.6 60 71.7
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 4.7e-16 87.8 119 46.2
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 4.7e-16 87.8 94 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 1.4e-15 86.3 83 47.0
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 3.4e-14 81.6 87 42.5
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.8e-13 78.6 62 62.9
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.8e-13 78.6 88 51.1
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 1.4e-12 76.3 69 50.7
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 3.5e-11 71.6 72 54.2
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 7.8e-11 70.5 56 58.9
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 7.8e-11 70.5 65 58.5
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 1.0e-10 70.1 72 51.4
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.7e-10 69.3 56 62.5
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 4.7e-08 61.2 31 90.3
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 6.1e-08 60.8 67 43.3


User provided reference genes

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