Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 2.3e-196 688.7 345 100.0
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-177 626.7 380 85.0
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 9.6e-139 497.3 371 70.6
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 6.9e-137 491.1 371 69.5
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-136 490.3 377 65.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 9.3e-134 480.7 347 70.6
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.5e-133 478.8 363 68.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-131 473.8 348 69.8
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-126 454.5 335 67.5
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 4.6e-125 451.8 335 67.5
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-123 446.0 360 62.8
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.2e-122 443.0 334 64.7
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.2e-120 437.2 335 64.8
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-118 430.6 302 68.5
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 8.8e-116 421.0 325 66.2
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-111 406.0 329 62.6
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-110 401.7 333 58.3
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-109 399.8 323 61.0
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 6.1e-109 398.3 324 63.0
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-95 354.0 334 53.0
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-95 353.6 329 54.4
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-85 319.3 265 58.1
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 4.5e-80 302.4 331 49.8
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 5.9e-80 302.0 330 49.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 2.5e-78 296.6 330 48.8
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.3e-78 296.2 330 47.9
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 5.6e-78 295.4 336 46.7
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 5.6e-78 295.4 330 47.9
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.2e-77 294.3 298 51.7
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.2e-77 294.3 326 49.4
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-77 294.3 330 47.9
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.8e-77 293.1 329 48.6
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 3.6e-77 292.7 326 49.1
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 4.7e-77 292.4 337 48.4
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 4.7e-77 292.4 330 48.5
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.1e-77 292.0 334 47.9
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 8.0e-77 291.6 329 48.3
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 8.0e-77 291.6 336 46.1
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.4e-76 290.8 326 48.2
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.8e-76 290.4 330 47.9
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 2.3e-76 290.0 334 47.9
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 2.3e-76 290.0 334 48.2
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 2.3e-76 290.0 334 48.2
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 3.0e-76 289.7 330 49.1
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 4.0e-76 289.3 331 48.3
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 5.2e-76 288.9 330 47.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.8e-76 288.5 330 47.9
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 6.8e-76 288.5 335 48.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 8.9e-76 288.1 329 48.0
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 1.2e-75 287.7 328 47.0
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 2.0e-75 287.0 334 47.9
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.6e-75 286.6 329 47.7
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 2.6e-75 286.6 328 47.9
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 2.6e-75 286.6 328 47.9
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 2.6e-75 286.6 334 46.4
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 2.6e-75 286.6 330 48.5
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 3.4e-75 286.2 330 48.2
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 3.4e-75 286.2 336 46.1
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-75 286.2 331 48.3
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 4.4e-75 285.8 330 47.3
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 4.4e-75 285.8 330 47.9
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 4.4e-75 285.8 328 48.2
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 5.7e-75 285.4 329 48.3
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 1.3e-74 284.3 330 47.6
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.2e-74 283.5 216 69.4
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 6.4e-74 282.0 330 46.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 6.4e-74 282.0 330 46.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.1e-73 281.2 316 47.5
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.1e-73 281.2 330 47.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.1e-73 281.2 330 46.7
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.8e-73 280.4 329 46.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.4e-73 280.0 330 46.4
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 3.2e-73 279.6 329 46.2
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.2e-73 279.6 329 45.0
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 3.2e-73 279.6 331 46.2
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 4.1e-73 279.3 329 47.4
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 4.1e-73 279.3 330 46.7
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 4.1e-73 279.3 330 46.7
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.4e-73 278.9 328 47.0
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 5.4e-73 278.9 328 45.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 7.0e-73 278.5 330 47.0
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 9.2e-73 278.1 330 46.4
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 9.2e-73 278.1 330 47.3
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.2e-72 277.7 330 46.4
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 1.2e-72 277.7 330 47.6
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 1.2e-72 277.7 330 46.1
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.6e-72 277.3 334 46.7
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.6e-72 277.3 330 45.8
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 2.7e-72 276.6 331 45.0
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 4.6e-72 275.8 330 46.4
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 4.6e-72 275.8 330 44.8
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 5.9e-72 275.4 330 43.9
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.3e-71 274.2 326 47.2
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.7e-71 273.9 329 46.5
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.7e-71 273.9 330 44.5
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.7e-71 273.9 330 47.0
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 3.0e-71 273.1 330 45.5
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 3.0e-71 273.1 330 45.5
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 3.9e-71 272.7 330 46.1
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 3.9e-71 272.7 330 45.5
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 6.6e-71 271.9 330 45.8
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 6.6e-71 271.9 330 46.1
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.1e-70 271.2 330 45.2
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.5e-70 270.8 330 45.2
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.9e-70 270.4 334 44.0
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 4.3e-70 269.2 328 45.7
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 7.3e-70 268.5 328 45.4
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 9.5e-70 268.1 349 43.6
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 9.5e-70 268.1 330 46.7
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.8e-69 266.5 330 44.8
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.4e-68 264.2 320 45.3
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.4e-68 264.2 330 45.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 3.1e-68 263.1 328 44.5
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.5e-67 260.8 329 41.3
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.3e-66 257.7 349 44.4
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.3e-66 257.7 324 46.3
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.9e-65 253.8 369 41.7
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.4e-65 253.4 369 42.0
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 5.4e-65 252.3 332 41.0
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 2.7e-64 250.0 320 44.1
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 6.6e-63 245.4 325 41.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.9e-62 243.8 411 37.7
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 1.7e-58 230.7 329 42.2
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.2e-58 230.3 181 59.7
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 5.4e-57 225.7 276 43.1
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-56 224.6 182 59.9
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.3e-55 221.1 271 44.6
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.5e-54 217.6 348 38.8
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.7e-53 212.6 276 44.9
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.4e-52 210.3 200 53.0
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 3.8e-50 203.0 227 48.5
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.5e-46 191.0 327 39.1
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-45 188.0 218 45.9
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 5.2e-44 182.6 196 49.5
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.0e-31 141.7 150 50.0
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.1e-30 138.3 182 43.4
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.5e-30 137.9 171 50.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 3.1e-28 130.2 143 48.3
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 1.5e-27 127.9 176 47.7
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.2e-26 124.0 117 52.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 2.1e-24 117.5 127 50.4
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.5e-19 101.3 105 45.7
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 1.3e-18 98.2 101 46.5
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 2.2e-18 97.4 167 38.3
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 4.2e-17 93.2 133 38.3
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.2e-17 93.2 369 24.7
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 3.0e-15 87.0 352 25.9
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-14 84.0 98 43.9
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.5e-11 74.7 358 24.9
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 1.5e-11 74.7 65 49.2
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.0e-11 74.3 297 27.9
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.5e-09 66.2 211 27.5
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-08 64.7 68 48.5
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 2.1e-08 64.3 65 47.7
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 3.6e-08 63.5 86 33.7
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.6e-08 63.2 43 65.1
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 2.3e-07 60.8 70 42.9
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 8.8e-07 58.9 52 53.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.5e-06 57.4 49 53.1
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 7.4e-06 55.8 81 40.7


User provided reference genes

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