Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.3e-91 339.7 176 100.0
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 2.7e-89 332.0 176 97.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.1e-40 170.6 182 52.7
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 4.0e-40 168.7 177 55.4
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 8.9e-40 167.5 178 52.2
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.5e-39 166.8 172 52.9
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.4e-39 165.6 179 50.8
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 3.4e-39 165.6 172 52.9
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.4e-39 165.2 179 49.2
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 7.5e-39 164.5 175 52.0
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 9.9e-39 164.1 179 49.2
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 9.9e-39 164.1 177 48.6
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.3e-38 163.7 179 50.3
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.7e-38 163.3 179 50.3
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.7e-38 163.3 168 53.6
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.2e-38 162.9 166 54.2
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.2e-38 162.9 179 51.4
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 2.2e-38 162.9 177 48.0
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 2.9e-38 162.5 179 50.8
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 2.9e-38 162.5 177 48.0
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 3.7e-38 162.2 179 52.5
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 3.7e-38 162.2 173 50.9
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 6.4e-38 161.4 179 48.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 6.4e-38 161.4 168 54.2
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 6.4e-38 161.4 180 50.6
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.1e-37 160.6 172 54.1
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 1.9e-37 159.8 166 53.0
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 2.4e-37 159.5 172 48.8
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 2.4e-37 159.5 178 48.9
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 2.4e-37 159.5 172 50.6
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 3.2e-37 159.1 164 53.7
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.2e-37 159.1 166 53.6
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.2e-37 159.1 168 54.2
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.1e-37 158.7 173 50.3
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 7.1e-37 157.9 166 53.0
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 9.2e-37 157.5 172 49.4
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 9.2e-37 157.5 166 51.8
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 9.2e-37 157.5 177 47.5
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 9.2e-37 157.5 163 52.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 1.2e-36 157.1 172 49.4
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.2e-36 157.1 165 52.1
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 1.2e-36 157.1 178 48.9
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 1.6e-36 156.8 179 48.6
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 2.1e-36 156.4 169 49.1
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 2.7e-36 156.0 153 54.2
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 2.7e-36 156.0 163 51.5
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 2.7e-36 156.0 163 51.5
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.7e-36 156.0 172 50.6
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 2.7e-36 156.0 174 48.9
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 3.5e-36 155.6 172 50.0
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 1.3e-35 153.7 164 53.0
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.3e-35 153.7 169 47.9
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 3.0e-35 152.5 179 48.6
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 3.9e-35 152.1 170 48.2
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 5.1e-35 151.8 172 47.7
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 5.1e-35 151.8 172 47.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 6.6e-35 151.4 173 48.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.1e-34 150.6 166 49.4
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.1e-34 150.6 166 49.4
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.5e-34 150.2 168 51.8
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.5e-34 150.2 166 50.6
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 1.9e-34 149.8 163 48.5
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 3.3e-34 149.1 171 48.5
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 4.3e-34 148.7 179 46.9
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 4.3e-34 148.7 168 50.0
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 7.3e-34 147.9 173 48.6
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 7.3e-34 147.9 167 50.9
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 2.1e-33 146.4 164 50.6
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 2.1e-33 146.4 166 48.8
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 2.1e-33 146.4 166 49.4
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 2.8e-33 146.0 174 48.9
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.4e-32 142.9 155 51.6
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 4.0e-32 142.1 188 44.7
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 8.9e-32 141.0 171 46.8
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 2.0e-31 139.8 154 53.2
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.6e-31 139.4 203 43.3
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 3.4e-31 139.0 152 55.9
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 4.4e-31 138.7 164 48.2
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 5.8e-31 138.3 165 47.3
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 7.6e-31 137.9 162 47.5
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 7.6e-31 137.9 162 47.5
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 7.6e-31 137.9 143 48.3
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 9.9e-31 137.5 176 44.9
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.2e-30 136.3 171 46.8
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 2.2e-30 136.3 165 47.3
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 2.2e-30 136.3 131 54.2
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 8.4e-30 134.4 167 44.3
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.1e-29 134.0 170 46.5
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 1.9e-29 133.3 168 41.7
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 3.2e-29 132.5 159 47.8
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 4.1e-29 132.1 147 51.7
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 5.4e-29 131.7 217 39.2
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 9.2e-29 131.0 165 49.1
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 9.2e-29 131.0 171 45.6
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.2e-28 130.6 135 47.4
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 1.6e-28 130.2 155 45.8
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 2.1e-28 129.8 181 43.1
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 2.1e-28 129.8 170 44.7
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 2.1e-28 129.8 172 47.7
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 2.7e-28 129.4 154 49.4
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 2.7e-28 129.4 154 49.4
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.5e-28 129.0 162 43.8
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 3.5e-28 129.0 154 47.4
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 6.0e-28 128.3 135 50.4
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 7.8e-28 127.9 141 46.8
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 5.1e-27 125.2 211 37.9
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 1.9e-26 123.2 172 43.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.3e-26 122.5 219 36.5
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 7.3e-26 121.3 137 49.6
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 7.3e-26 121.3 157 45.9
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.7e-25 118.6 159 40.9
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 4.7e-25 118.6 135 46.7
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 6.2e-25 118.2 136 55.1
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 8.1e-25 117.9 147 44.2
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 8.1e-25 117.9 136 53.7
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 1.1e-24 117.5 149 49.0
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 3.1e-24 115.9 166 42.2
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 4.0e-24 115.5 190 37.4
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 1.5e-23 113.6 134 51.5
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 2.0e-23 113.2 151 45.7
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 7.6e-23 111.3 115 52.2
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 9.9e-23 110.9 163 39.3
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.7e-22 110.2 155 44.5
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.2e-22 109.8 156 44.9
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.1e-21 107.5 83 56.6
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 1.6e-20 103.6 94 52.1
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 7.8e-20 101.3 114 54.4
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.0e-19 100.9 86 54.7
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 1.3e-19 100.5 162 35.8
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 8.7e-19 97.8 137 41.6
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 4.3e-18 95.5 176 35.8
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 8.1e-17 91.3 91 52.7
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 1.4e-16 90.5 170 35.9
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.4e-16 89.7 133 42.9
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 4.0e-16 89.0 177 35.0
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 9.0e-16 87.8 86 46.5
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 3.2e-13 79.3 107 53.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 2.7e-12 76.3 78 57.7
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 2.3e-11 73.2 102 45.1
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 6.7e-11 71.6 165 36.4
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 8.7e-11 71.2 103 40.8
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 1.9e-10 70.1 83 53.0
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 5.6e-10 68.6 83 54.2
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 4.8e-09 65.5 83 51.8
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 6.2e-09 65.1 84 50.0
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.5e-07 60.5 84 48.8
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.4e-06 55.1 49 61.2
CBR_g18647 Chara braunii HOM05D004607 ORTHO05D005836 8.4e-06 54.7 165 32.1
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 8.4e-06 54.7 47 66.0
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 8.4e-06 54.7 47 66.0


User provided reference genes

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