Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 0.0e+00 1233.4 636 100.0
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 0.0e+00 1208.4 636 97.5
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.0e-227 792.7 641 67.9
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 4.7e-200 701.8 643 63.6
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.1e-199 700.7 533 68.3
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.7e-197 693.3 596 64.3
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 6.0e-195 684.9 647 60.4
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.4e-190 668.7 546 66.8
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 7.6e-190 667.9 587 63.4
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.1e-188 664.1 575 63.7
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.9e-188 663.3 541 66.2
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 6.0e-187 658.3 595 61.5
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.0e-186 657.5 551 65.2
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 1.3e-186 657.1 636 59.4
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 7.4e-185 651.4 578 62.5
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.3e-184 650.6 548 65.0
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 2.1e-184 649.8 619 60.3
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 8.1e-184 647.9 581 62.3
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 8.1e-184 647.9 591 61.8
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.4e-183 647.1 667 56.8
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.2e-182 644.0 563 62.7
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 3.4e-182 642.5 575 61.2
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.3e-181 640.6 548 63.7
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 2.4e-180 636.3 562 61.7
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 5.5e-180 635.2 545 63.7
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 3.5e-179 632.5 573 61.4
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.1e-177 627.5 666 55.0
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.9e-177 626.7 536 63.2
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.3e-176 624.0 632 56.0
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 1.6e-176 623.6 548 61.5
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 2.1e-176 623.2 543 63.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.1e-175 619.4 643 57.5
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 9.0e-175 617.8 546 63.4
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.6e-174 616.3 557 61.4
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 3.4e-174 615.9 577 59.8
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 3.4e-174 615.9 574 59.9
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 5.8e-174 615.1 588 59.2
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 5.8e-174 615.1 558 60.8
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 5.8e-174 615.1 548 60.6
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 7.6e-174 614.8 582 58.9
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.3e-173 614.0 572 59.3
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.7e-173 613.6 573 59.3
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.7e-173 613.6 597 59.0
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.2e-173 613.2 550 62.2
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 2.9e-173 612.8 659 55.8
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 4.9e-173 612.1 564 60.3
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 4.9e-173 612.1 547 61.8
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 4.9e-173 612.1 549 60.8
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 6.5e-173 611.7 591 59.4
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 8.4e-173 611.3 549 60.5
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.1e-172 610.9 576 59.0
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.4e-172 610.5 550 60.7
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.4e-172 610.5 584 58.4
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.9e-172 610.1 593 59.7
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.9e-172 610.1 595 58.8
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 4.2e-172 609.0 546 60.4
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 5.5e-172 608.6 586 58.0
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.2e-171 607.4 558 60.4
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 2.7e-171 606.3 659 55.1
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 3.5e-171 605.9 575 58.8
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.6e-171 605.5 593 59.2
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 6.0e-171 605.1 574 58.4
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.3e-170 604.0 653 56.5
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.8e-170 603.6 542 61.3
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.3e-170 603.2 575 58.6
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 3.9e-170 602.4 548 59.7
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 8.7e-170 601.3 618 57.1
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.5e-169 599.7 541 61.4
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 3.3e-169 599.4 569 57.8
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 6.9e-167 591.7 548 60.6
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.2e-166 590.9 543 59.5
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 2.6e-166 589.7 588 58.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.3e-165 587.4 575 58.3
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 7.9e-163 578.2 579 58.9
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 6.3e-160 568.5 576 57.3
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.8e-159 567.0 551 58.1
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.2e-158 564.3 635 53.2
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.6e-155 552.7 525 61.7
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 7.4e-153 545.0 558 57.2
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.0e-149 534.6 550 56.7
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.5e-140 504.2 475 60.2
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.7e-137 492.3 517 57.1
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 5.5e-132 475.7 479 57.0
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.0e-130 471.5 575 51.7
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.5e-129 467.6 546 48.9
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 2.4e-111 407.1 437 54.0
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.2e-110 404.8 569 46.0
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.7e-109 401.0 409 58.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 4.3e-108 396.4 411 54.5
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 6.8e-106 389.0 411 53.8
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 7.5e-105 385.6 373 60.3
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.4e-103 381.3 313 64.2
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.0e-102 377.5 430 52.8
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 6.8e-98 362.5 420 51.7
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.1e-90 338.6 376 52.9
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.2e-88 330.9 469 45.4
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 6.0e-86 322.8 583 38.9
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 2.2e-72 277.7 253 60.1
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 3.8e-56 223.8 552 32.8
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 3.4e-49 200.7 180 62.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.4e-34 151.4 137 58.4
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.4e-34 151.4 133 59.4
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 2.9e-32 144.4 335 31.6
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.6e-30 138.7 115 61.7
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 8.0e-30 136.3 170 45.9
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 7.4e-28 129.8 162 46.3
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 6.3e-27 126.7 97 67.0
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.1e-22 111.7 99 58.6
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 8.8e-21 106.3 81 67.9
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.8e-18 98.6 59 81.4
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 2.5e-15 88.2 59 72.9
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 4.7e-14 84.0 77 55.8
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 4.0e-13 80.9 185 32.4
MCO12G226 Micromonas commoda HOM05D006816 ORTHO05D008666 2.9e-08 64.7 188 26.1


User provided reference genes

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