Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.2e-162 576.6 318 100.0
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.1e-149 533.5 318 86.8
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 3.0e-126 455.7 318 71.4
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.2e-124 450.3 318 70.4
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 2.8e-124 449.1 318 70.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.4e-123 446.8 318 69.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 4.9e-121 438.3 318 67.6
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 5.4e-120 434.9 320 68.1
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.3e-118 429.5 318 68.2
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.6e-117 424.9 314 67.2
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 7.3e-117 424.5 318 67.0
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 9.5e-117 424.1 318 67.6
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 9.5e-117 424.1 318 66.4
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.2e-116 423.7 315 66.3
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.2e-116 423.7 315 66.3
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.2e-116 423.7 316 65.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.6e-116 423.3 316 68.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.1e-116 422.9 318 67.3
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.8e-116 422.5 315 66.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.6e-116 422.2 318 66.4
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 6.2e-116 421.4 317 64.4
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 6.2e-116 421.4 321 67.6
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.2e-116 421.4 316 67.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.8e-115 419.9 317 66.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 2.4e-115 419.5 318 66.4
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 8.9e-115 417.5 314 65.6
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.2e-114 417.2 318 65.4
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.0e-114 416.4 317 64.0
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.4e-114 415.2 316 66.5
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.8e-114 414.8 316 64.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.3e-113 413.7 318 66.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.7e-113 413.3 318 64.8
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.8e-113 412.1 317 62.8
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 4.9e-113 411.8 324 62.7
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.9e-113 411.8 318 65.1
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 8.4e-113 411.0 304 67.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.4e-112 409.5 325 63.1
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.2e-112 409.1 318 64.2
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.1e-112 408.7 317 65.0
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 5.4e-112 408.3 316 62.7
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 9.2e-112 407.5 316 63.0
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 9.2e-112 407.5 316 63.0
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.2e-111 407.1 317 64.7
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.6e-111 405.2 316 63.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 7.8e-111 404.4 317 62.5
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-110 404.1 316 62.0
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.7e-110 403.3 318 63.5
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 3.0e-110 402.5 316 61.1
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 5.1e-110 401.7 316 64.9
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.1e-110 401.7 318 62.3
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.1e-109 400.6 316 61.7
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-109 400.6 318 62.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.9e-109 399.8 316 61.1
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.9e-109 399.8 322 61.5
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 2.5e-109 399.4 303 65.3
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 2.5e-109 399.4 309 63.4
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 7.3e-109 397.9 316 60.4
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.6e-109 397.5 317 60.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 9.6e-109 397.5 316 60.4
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.1e-108 396.4 319 62.7
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.8e-108 396.0 318 64.8
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 6.2e-108 394.8 315 63.2
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 8.1e-108 394.4 361 58.4
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 6.9e-107 391.3 304 63.5
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 9.9e-106 387.5 313 60.4
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.1e-104 384.0 338 58.9
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.9e-104 383.3 318 59.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.4e-104 382.9 303 61.4
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 7.1e-104 381.3 297 63.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.3e-104 380.9 320 63.1
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 9.3e-104 380.9 306 61.8
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 9.3e-104 380.9 306 61.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 5.1e-102 375.2 304 61.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.5e-101 373.6 312 61.2
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.6e-101 371.7 307 60.9
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-97 359.8 318 60.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.4e-96 356.3 318 59.4
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.1e-95 353.2 269 65.8
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.7e-94 347.8 289 61.2
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.5e-93 346.3 339 56.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.3e-93 345.9 306 58.8
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 8.1e-92 341.3 298 59.7
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 4.0e-91 339.0 316 57.3
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.4e-88 329.7 270 63.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.4e-88 329.7 270 63.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 7.6e-82 308.1 315 53.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 3.2e-80 302.8 322 47.5
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 7.1e-80 301.6 316 47.5
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.3e-78 297.4 248 60.1
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-77 294.3 233 63.5
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 7.4e-77 291.6 255 60.0
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 8.2e-76 288.1 216 65.7
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.2e-74 284.3 319 49.8
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.8e-73 279.3 316 44.6
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.2e-72 276.2 315 43.8
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 8.2e-68 261.5 256 55.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.5e-65 251.9 212 59.0
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 9.4e-64 248.1 305 39.7
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 3.6e-63 246.1 181 68.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 9.7e-61 238.0 195 59.0
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.4e-59 233.4 268 45.9
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.2e-57 226.9 233 51.5
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 2.9e-57 226.5 332 44.3
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.7e-52 210.7 146 70.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.0e-46 191.4 315 35.2
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-40 170.2 127 63.0
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 4.2e-40 169.5 228 43.0
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 3.6e-39 166.4 129 63.6
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 8.6e-33 145.2 247 36.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 5.9e-26 122.5 70 81.4
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.9e-24 117.5 93 59.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.7e-23 112.8 88 63.6
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 6.4e-20 102.4 102 52.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 2.6e-13 80.5 187 31.6
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-10 70.5 72 50.0
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 6.8e-06 55.8 43 55.8


User provided reference genes

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