Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 0.0e+00 1506.1 741 100.0
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 0.0e+00 1392.5 732 93.2
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 4.0e-283 978.0 753 64.7
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 7.8e-271 937.2 755 62.0
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 9.6e-261 903.7 705 62.7
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 2.4e-259 899.0 705 62.6
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 6.0e-255 884.4 713 61.3
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 3.0e-254 882.1 704 61.6
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 7.3e-253 877.5 705 61.1
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 1.6e-252 876.3 739 59.7
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 3.6e-252 875.2 740 60.1
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 3.6e-252 875.2 740 60.0
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 1.8e-251 872.8 696 61.5
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 2.0e-250 869.4 727 60.2
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 2.6e-250 869.0 741 60.2
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 6.4e-249 864.4 758 60.0
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 1.1e-248 863.6 715 60.0
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 5.4e-248 861.3 705 59.7
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 9.3e-248 860.5 748 57.8
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 2.7e-247 859.0 752 58.5
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 6.7e-246 854.4 745 59.1
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 2.5e-245 852.4 749 56.5
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 7.4e-245 850.9 708 59.5
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 1.3e-244 850.1 723 58.5
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 3.7e-244 848.6 709 59.2
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 3.7e-244 848.6 696 59.8
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 6.2e-244 847.8 752 57.2
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.1e-243 847.0 719 59.0
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 3.4e-242 842.0 696 59.5
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 3.4e-242 842.0 736 58.3
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 1.0e-241 840.5 723 58.6
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 2.9e-241 839.0 730 58.1
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 8.4e-241 837.4 708 58.3
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 1.1e-240 837.0 708 58.6
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 1.3e-238 830.1 725 58.6
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 1.8e-238 829.7 702 58.7
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 3.0e-238 828.9 749 56.7
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.1e-237 827.0 725 57.9
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 1.1e-237 827.0 725 56.8
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 4.3e-237 825.1 740 56.2
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 5.7e-237 824.7 741 55.7
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 7.4e-237 824.3 697 58.7
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 9.6e-237 823.9 747 56.0
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 2.1e-236 822.8 735 57.0
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 3.7e-236 822.0 729 58.0
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 1.1e-235 820.5 702 58.1
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 4.5e-234 815.1 747 56.0
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 5.8e-234 814.7 699 59.5
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 1.7e-233 813.1 737 56.6
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 2.9e-233 812.4 748 55.2
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 2.9e-233 812.4 693 58.0
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 3.8e-233 812.0 742 55.3
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.1e-232 810.4 729 56.1
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 1.1e-232 810.4 779 53.4
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 7.4e-229 797.7 741 55.2
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 6.3e-228 794.7 725 55.7
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 1.4e-227 793.5 738 54.9
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 1.2e-226 790.4 622 62.7
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 7.7e-226 787.7 709 55.7
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 1.3e-225 786.9 731 54.4
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 1.4e-224 783.5 740 54.6
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 2.1e-223 779.6 693 56.0
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 3.6e-223 778.9 748 53.7
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 1.0e-222 777.3 743 53.2
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.8e-222 776.5 732 54.9
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 4.3e-221 771.9 748 53.1
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 4.3e-221 771.9 738 54.3
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 2.8e-220 769.2 695 55.5
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 3.7e-220 768.8 750 53.3
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 3.7e-220 768.8 738 51.8
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 6.3e-220 768.1 722 53.2
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 2.4e-219 766.1 695 55.3
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.4e-219 766.1 710 53.9
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 6.9e-219 764.6 750 52.7
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 5.0e-217 758.4 704 55.0
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 8.5e-217 757.7 617 60.9
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 9.4e-216 754.2 809 49.3
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 2.2e-212 743.0 692 54.3
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 5.9e-210 734.9 668 54.8
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 1.3e-209 733.8 699 54.1
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.2e-209 733.0 697 53.1
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 5.0e-209 731.9 649 57.8
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 2.5e-208 729.6 732 51.2
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 3.2e-208 729.2 713 53.3
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 2.3e-206 723.0 678 54.4
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 3.3e-205 719.2 714 53.4
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 4.7e-199 698.7 658 54.3
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 5.7e-197 691.8 707 50.2
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 4.5e-194 682.2 732 49.0
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 1.7e-193 680.2 691 52.7
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 6.6e-185 651.7 635 51.8
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 1.2e-183 647.5 550 58.7
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.2e-181 641.0 490 64.3
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 1.4e-179 634.0 676 50.0
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 8.3e-172 608.2 703 46.2
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.8e-167 593.2 586 52.2
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 5.8e-165 585.5 650 50.0
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.1e-163 581.3 731 45.3
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 1.2e-141 508.1 537 50.8
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 8.7e-137 491.9 372 66.7
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 5.6e-128 462.6 749 36.2
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 2.4e-126 457.2 674 38.7
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 4.8e-119 433.0 702 36.0
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 8.2e-119 432.2 672 38.1
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 1.0e-116 425.2 756 36.1
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 1.0e-116 425.2 776 36.5
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 1.2e-114 418.3 420 51.9
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 1.1e-110 405.2 333 58.6
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 5.3e-110 402.9 827 34.0
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 1.2e-101 375.2 793 34.0
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 2.2e-100 370.9 365 49.9
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 2.7e-77 294.3 340 49.7
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.9e-75 288.1 288 53.8
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 2.3e-68 264.6 571 32.4
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.4e-54 218.8 340 37.9
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 1.7e-52 211.8 133 72.9
Nn1g09626 Nelumbo nucifera HOM05D005923 ORTHO05D007376 3.9e-52 210.7 146 69.9
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 5.6e-51 206.8 191 53.9
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 1.4e-49 202.2 180 58.9
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 1.0e-44 186.0 463 31.7
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 5.2e-41 173.7 167 49.7
Os03g0260100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 5.4e-30 137.1 127 48.0
Atru.chr12.1656 Acer truncatum HOM05D005923 ORTHO05D007376 7.1e-30 136.7 123 53.7
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 2.3e-28 131.7 89 61.8
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 6.2e-18 97.1 75 56.0
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 6.7e-12 77.0 407 23.1
Nitab4.5_0001853g0060 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.3e-10 72.8 96 37.5
MD04G1248000 Malus domestica HOM05D005923 ORTHO05D007376 2.8e-10 71.6 57 56.1
Nitab4.5_0001853g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.1e-09 69.7 96 37.5
Ciclev10013254m.g Citrus clementina HOM05D005923 ORTHO05D007376 1.3e-07 62.8 97 41.2
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.7e-07 62.4 181 30.9
SMO335G0023 Selaginella moellendorffii HOM05D047118 ORTHO05D007376 1.1e-06 59.7 130 35.4


User provided reference genes

Program Settings