Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.1e-170 603.2 305 100.0
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 6.9e-157 557.4 315 90.5
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 7.3e-114 414.5 304 68.8
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.6e-103 379.4 297 65.3
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 2.7e-100 369.4 304 62.8
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 5.0e-99 365.2 300 62.7
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.5e-98 363.6 304 64.1
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 8.9e-96 354.4 303 59.7
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.5e-95 353.6 303 59.4
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 2.6e-95 352.8 304 59.2
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 7.5e-95 351.3 305 59.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 3.7e-94 349.0 303 59.4
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 4.9e-94 348.6 299 61.2
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.9e-93 346.7 304 58.9
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.4e-93 346.3 304 60.5
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 2.4e-93 346.3 304 56.2
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 7.1e-93 344.7 302 58.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.2e-92 344.0 303 57.1
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.6e-92 343.6 303 58.1
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.6e-92 343.6 302 58.6
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.1e-92 343.2 303 57.8
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.5e-92 342.4 304 55.3
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 6.0e-92 341.7 304 55.6
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.0e-91 340.9 304 58.9
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.3e-91 340.5 302 57.3
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 1.7e-91 340.1 299 58.9
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 3.0e-91 339.3 304 56.6
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 5.1e-91 338.6 304 54.9
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 2.5e-90 336.3 294 60.2
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.6e-89 333.6 273 63.0
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.6e-89 332.4 303 55.4
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 3.6e-89 332.4 299 55.9
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 4.7e-89 332.0 304 56.6
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 6.2e-89 331.6 308 57.1
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 8.1e-89 331.3 304 53.6
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.1e-88 330.9 327 52.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.8e-88 330.1 299 56.2
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 6.8e-88 328.2 299 55.2
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 6.8e-88 328.2 305 54.4
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.2e-87 327.4 304 54.6
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.5e-87 327.0 278 61.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.0e-87 326.6 304 56.9
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 2.0e-87 326.6 305 53.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-87 326.6 308 58.1
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 2.6e-87 326.2 299 57.2
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 4.4e-87 325.5 303 55.1
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 4.4e-87 325.5 304 56.2
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 5.8e-87 325.1 299 55.9
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 7.6e-87 324.7 305 56.7
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-86 323.9 296 56.1
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.3e-86 323.9 299 54.2
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.3e-86 323.9 308 54.9
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.7e-86 323.6 304 55.9
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 2.2e-86 323.2 299 55.5
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 3.8e-86 322.4 299 55.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 3.8e-86 322.4 299 55.2
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 6.4e-86 321.6 304 54.6
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 8.4e-86 321.2 304 54.6
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 2.4e-85 319.7 299 54.8
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 3.2e-85 319.3 299 53.8
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.4e-85 318.5 304 56.6
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 9.2e-85 317.8 299 54.5
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 9.2e-85 317.8 299 54.5
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.2e-84 317.4 304 52.6
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.6e-84 317.0 305 55.4
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.6e-84 317.0 304 56.6
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 3.5e-84 315.8 304 52.6
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 6.0e-84 315.1 306 53.6
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.0e-84 315.1 306 53.6
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.0e-83 314.3 305 51.8
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.3e-83 313.9 310 53.5
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.3e-83 313.9 299 55.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.7e-83 313.5 304 53.6
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.7e-83 313.5 300 53.3
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 3.0e-83 312.8 306 54.2
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.1e-82 310.8 306 55.2
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 1.5e-82 310.5 305 53.8
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.9e-82 310.1 304 54.6
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.9e-82 310.1 304 53.3
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.5e-82 309.7 305 52.5
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 3.3e-82 309.3 299 54.5
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 4.3e-82 308.9 304 52.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.6e-81 305.8 306 53.6
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 8.1e-81 304.7 296 52.4
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 8.1e-81 304.7 305 53.4
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.4e-80 303.9 305 52.5
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 7.6e-79 298.1 299 52.8
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.3e-78 297.4 304 50.0
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.9e-78 296.2 304 53.0
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 2.4e-77 293.1 304 48.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 5.1e-75 285.4 314 49.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.7e-75 284.6 314 49.4
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.3e-70 270.8 299 51.2
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.0e-67 259.6 208 63.5
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.8e-65 252.3 265 51.3
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 2.4e-64 250.0 250 50.8
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 3.5e-60 236.1 307 44.6
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.0e-59 234.6 236 52.1
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.3e-59 234.2 299 47.8
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 8.7e-59 231.5 273 48.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.8e-56 223.8 201 56.7
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.3e-51 206.8 202 53.0
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 5.9e-47 192.2 247 42.9
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.3e-42 176.0 173 54.9
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.7e-41 174.1 194 50.5
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.3e-33 147.9 218 39.0
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 5.3e-32 142.5 106 66.0
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 4.5e-31 139.4 304 30.3
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 6.5e-30 135.6 118 57.6
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.0e-27 128.3 124 50.0
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 8.2e-25 118.6 121 51.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 2.9e-22 110.2 104 53.8
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 3.8e-22 109.8 135 48.9
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-21 107.1 135 48.1
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 4.2e-21 106.3 135 48.1
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-19 101.3 68 64.7
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.8e-19 100.9 124 50.0
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 3.0e-19 100.1 67 65.7
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-18 97.8 124 48.4
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.7e-17 93.2 288 26.4
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.4e-16 90.5 256 30.5
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 3.5e-15 86.7 138 42.0
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 5.9e-15 85.9 62 54.8
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 3.2e-13 80.1 76 56.6
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 1.4e-11 74.7 118 36.4
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-06 58.2 82 41.5


User provided reference genes

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