Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 3.3e-127 458.4 230 100.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 8.2e-102 374.0 267 75.3
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.0e-55 219.9 272 49.3
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 9.8e-55 217.6 263 47.9
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 8.3e-54 214.5 263 46.8
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 8.3e-54 214.5 226 53.1
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.9e-53 213.4 265 45.3
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.6e-52 210.3 251 47.0
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.8e-52 208.0 272 46.7
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 4.3e-50 202.2 255 47.5
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 2.8e-49 199.5 252 45.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 3.6e-49 199.1 251 45.8
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 4.7e-49 198.7 254 45.7
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 6.2e-49 198.4 215 49.3
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 8.0e-49 198.0 268 44.0
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.1e-48 197.6 270 43.3
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.4e-48 197.2 251 44.6
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 1.4e-48 197.2 258 44.6
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.4e-48 197.2 246 46.3
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.4e-48 197.2 274 44.9
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.3e-48 196.4 258 45.7
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 2.3e-48 196.4 258 45.7
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 3.1e-48 196.1 252 45.2
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 3.1e-48 196.1 251 44.2
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 4.0e-48 195.7 259 44.0
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 6.8e-48 194.9 252 43.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 8.9e-48 194.5 256 44.5
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.2e-47 194.1 269 45.0
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.0e-47 193.4 266 42.5
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.6e-47 193.0 244 46.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 3.4e-47 192.6 249 44.6
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 7.5e-47 191.4 214 50.5
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 3.7e-46 189.1 247 44.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 4.9e-46 188.7 266 42.1
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 8.3e-46 188.0 270 44.1
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-45 187.6 214 50.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.1e-45 187.6 253 43.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.4e-45 187.2 264 41.7
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.1e-44 183.3 262 41.6
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 2.1e-44 183.3 267 43.1
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.5e-44 182.6 262 42.7
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 6.0e-44 181.8 250 43.2
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 7.8e-44 181.4 262 43.9
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.0e-43 181.0 261 42.5
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.3e-43 180.6 271 39.1
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 8.6e-43 177.9 260 41.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 1.5e-42 177.2 272 40.8
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 5.6e-42 175.3 271 39.9
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 7.3e-42 174.9 250 42.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 7.3e-42 174.9 275 38.9
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.2e-41 174.1 247 43.3
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.1e-41 173.3 261 40.2
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.3e-40 169.9 316 36.1
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 5.2e-40 168.7 270 41.1
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.4e-39 166.0 245 41.6
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 3.4e-39 166.0 253 39.5
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.8e-39 165.2 248 39.9
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.7e-38 163.7 264 40.2
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.9e-38 162.9 237 41.8
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.9e-38 162.9 204 44.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 3.7e-38 162.5 318 35.5
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 4.9e-38 162.2 260 40.8
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 8.3e-38 161.4 260 39.6
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 8.3e-38 161.4 259 38.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.4e-37 160.6 245 40.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.4e-37 159.8 222 43.7
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.2e-37 159.5 245 40.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.1e-37 159.1 247 39.7
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 5.4e-37 158.7 256 38.7
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.2e-36 157.5 269 37.9
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.2e-36 157.5 257 38.1
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.5e-36 156.0 265 36.2
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.5e-36 156.0 268 37.7
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.7e-35 153.7 260 40.0
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 3.0e-35 152.9 205 44.4
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.1e-34 151.0 245 38.8
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 4.3e-34 149.1 210 45.7
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 3.6e-33 146.0 245 38.8
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 4.7e-33 145.6 245 37.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 4.7e-33 145.6 245 37.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 4.7e-33 145.6 245 37.6
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 2.6e-31 139.8 194 42.3
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 3.8e-30 136.0 188 43.1
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 3.8e-30 136.0 240 38.8
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.1e-29 134.4 243 37.0
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.4e-29 134.0 270 34.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.2e-28 131.0 228 38.6
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 6.6e-27 125.2 182 40.7
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 6.2e-25 118.6 216 37.0
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 6.9e-24 115.2 143 42.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.9e-21 107.1 225 34.7
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 7.1e-21 105.1 152 42.8
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.6e-20 104.0 178 38.2
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 6.0e-20 102.1 179 36.9
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 2.1e-17 93.6 173 37.6
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.1e-16 91.3 206 33.5
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.1e-16 91.3 62 62.9
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.8e-16 90.5 258 27.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 1.5e-15 87.4 198 26.8
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.4e-13 80.9 159 31.4
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 1.3e-11 74.3 138 34.1
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.1e-10 71.2 246 26.0
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 7.6e-07 58.5 80 37.5
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.7e-06 57.4 119 31.1


User provided reference genes

Program Settings