Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 5.2e-81 304.3 149 100.0
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 1.3e-71 273.1 149 89.9
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 2.7e-61 238.8 154 79.2
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 3.8e-60 235.0 154 77.9
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 3.8e-60 235.0 154 77.9
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 5.2e-57 224.6 150 75.3
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-36 157.1 157 52.9
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-36 157.1 157 52.9
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 5.2e-25 118.2 160 46.2
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 9.3e-22 107.5 148 41.2
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 9.3e-22 107.5 142 42.3
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 8.7e-20 100.9 143 41.3
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 8.7e-20 100.9 143 42.0
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 1.5e-19 100.1 137 42.3
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 4.3e-19 98.6 137 42.3
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 4.3e-19 98.6 142 39.4
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 5.6e-19 98.2 141 43.3
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 9.6e-19 97.4 115 50.4
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 9.6e-19 97.4 143 40.6
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-18 96.7 143 42.7
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 2.1e-18 96.3 134 38.8
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 3.6e-18 95.5 144 39.6
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 8.1e-18 94.4 137 40.9
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 1.4e-17 93.6 140 39.3
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-17 93.6 141 42.6
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-17 93.6 141 41.8
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-17 92.4 135 42.2
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 3.1e-17 92.4 142 40.1
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 4.0e-17 92.0 134 36.6
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 4.0e-17 92.0 134 36.6
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 5.3e-17 91.7 140 37.9
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 5.3e-17 91.7 143 39.2
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 6.9e-17 91.3 141 41.1
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 6.9e-17 91.3 146 37.7
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 9.0e-17 90.9 143 41.3
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-16 90.5 142 40.8
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.5e-16 90.1 136 41.2
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-16 89.4 141 37.6
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 3.4e-16 89.0 143 39.2
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 4.5e-16 88.6 143 35.7
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.3e-15 87.0 136 40.4
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.3e-15 87.0 136 40.4
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 2.2e-15 86.3 144 36.8
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.2e-15 86.3 136 40.4
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-15 85.5 143 37.1
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 4.9e-15 85.1 139 35.3
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 4.9e-15 85.1 142 38.0
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.4e-15 84.7 136 39.7
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-14 83.6 126 35.7
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 1.9e-14 83.2 135 35.6
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 1.9e-14 83.2 135 35.6
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.4e-14 82.8 144 36.8
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 3.2e-14 82.4 100 43.0
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 4.2e-14 82.0 143 37.8
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.4e-14 81.6 143 35.7
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 9.3e-14 80.9 143 37.8
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 1.6e-13 80.1 136 39.0
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.6e-13 80.1 143 36.4
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 2.3e-12 76.3 144 37.5
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.3e-12 76.3 137 37.2
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 3.9e-12 75.5 147 37.4
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.9e-12 75.5 144 36.1
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 6.7e-12 74.7 144 36.8
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 8.7e-12 74.3 143 36.4
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.1e-11 73.9 143 33.6
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.5e-11 72.8 135 34.8
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 3.3e-11 72.4 67 50.7
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 5.6e-11 71.6 146 34.9
PSO423G0021 Papaver somniferum HOM05D007540 ORTHO05D009531 5.6e-11 71.6 80 46.2
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.4e-11 71.2 142 33.1
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 9.6e-11 70.9 151 33.8
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 9.6e-11 70.9 134 35.1
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.6e-11 70.9 111 41.4
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.6e-10 70.1 142 37.3
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.1e-10 69.7 143 35.0
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 4.8e-10 68.6 132 31.8
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 1.8e-09 66.6 150 32.7
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 6.9e-09 64.7 64 48.4
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.9e-09 64.7 143 32.9
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 1.5e-08 63.5 141 31.9
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 1.5e-08 63.5 141 31.9
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 7.6e-08 61.2 145 29.7
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 2.9e-07 59.3 137 33.6
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.9e-06 56.6 103 35.9
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 2.4e-06 56.2 129 31.8
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.4e-06 56.2 133 30.8
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.5e-06 55.1 96 35.4
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.3e-06 54.3 62 48.4


User provided reference genes

Program Settings