Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0468 Papaver somniferum HOM05D004205 ORTHO05D000241 7.1e-116 420.6 215 100.0
PSO675G7013 Papaver somniferum HOM05D000285 ORTHO05D000241 2.3e-53 213.0 221 62.0
PSO170G0540 Papaver somniferum HOM05D000285 ORTHO05D000241 3.2e-47 192.6 236 55.1
PSO017G2795 Papaver somniferum HOM05D000285 ORTHO05D000241 2.1e-43 179.9 237 51.5
PSO170G0023 Papaver somniferum HOM05D000285 ORTHO05D000241 5.2e-42 175.3 292 46.2
PSO017G1645 Papaver somniferum HOM05D000285 ORTHO05D000241 2.2e-40 169.9 291 45.4
PSO170G2541 Papaver somniferum HOM05D000285 ORTHO05D000241 3.7e-40 169.1 232 52.2
PSO017G3753 Papaver somniferum HOM05D000285 ORTHO05D000241 3.3e-36 156.0 342 38.6
PSO675G1591 Papaver somniferum HOM05D000285 ORTHO05D000241 2.1e-30 136.7 127 66.1
PSO675G2835 Papaver somniferum HOM05D004205 ORTHO05D004977 1.7e-24 117.1 213 39.9
PSO675G4620 Papaver somniferum HOM05D000285 ORTHO05D000241 9.3e-15 84.7 98 56.1
GSVIVG01002063001 Vitis vinifera HOM05D004205 ORTHO05D004977 4.3e-12 75.9 138 37.7
Potri.011G051300 Populus trichocarpa HOM05D004205 ORTHO05D004977 1.4e-10 70.9 133 42.9
TAR629G3452 Trochodendron aralioides HOM05D004205 ORTHO05D004977 1.8e-10 70.5 194 32.5
Eucgr.E03316 Eucalyptus grandis HOM05D004205 ORTHO05D004977 6.9e-10 68.6 122 38.5
QL05p039984 Quercus lobata HOM05D004205 ORTHO05D004977 6.9e-10 68.6 115 40.0
Haze_06483 Corylus avellana HOM05D004205 ORTHO05D004977 1.2e-09 67.8 147 34.0
Cfa000433 Carpinus fangiana HOM05D001170 ORTHO05D006602 2.0e-09 67.0 195 33.3
TWI38G1735 Tripterygium wilfordii HOM05D004205 ORTHO05D004977 2.6e-09 66.6 150 36.0
Aqoxy1G02498 Aquilegia oxysepala HOM05D004205 ORTHO05D004977 5.8e-09 65.5 198 27.8
arahy.Tifrunner.gnm1.ann1.R761X6 Arachis hypogaea HOM05D004205 ORTHO05D004977 7.6e-09 65.1 103 40.8
arahy.Tifrunner.gnm1.ann1.USTZ5W Arachis hypogaea HOM05D004205 ORTHO05D001463 7.6e-09 65.1 103 40.8
Duzib235G1315 Durio zibethinus HOM05D004205 ORTHO05D004977 1.3e-08 64.3 108 38.9
Lalb_Chr20g0121931 Lupinus albus HOM05D004205 ORTHO05D004977 1.3e-08 64.3 112 35.7
CiPaw.09G058700 Carya illinoinensis HOM05D004205 ORTHO05D004977 1.7e-08 63.9 115 40.0
Sabra11G0035300 Salix brachista HOM05D004205 ORTHO05D004977 1.7e-08 63.9 158 36.7
arahy.Tifrunner.gnm1.ann1.7PU9A6 Arachis hypogaea HOM05D004205 ORTHO05D004977 4.9e-08 62.4 110 41.8
arahy.Tifrunner.gnm1.ann1.XKDE21 Arachis hypogaea HOM05D000190 ORTHO05D000113 6.4e-08 62.0 124 39.5
Lj6g0013418 Lotus japonicus HOM05D004205 ORTHO05D004977 1.1e-07 61.2 111 35.1
Cfa020556 Carpinus fangiana HOM05D004205 ORTHO05D004977 1.4e-07 60.8 215 29.8
Glyma.13G240200 Glycine max HOM05D004205 ORTHO05D004977 1.4e-07 60.8 104 39.4
VMungo0540G0305 Vigna mungo HOM05D004205 ORTHO05D004977 1.9e-07 60.5 113 36.3
Ca_00326_v3 Cicer arietinum L. HOM05D004205 ORTHO05D004977 2.4e-07 60.1 105 41.9
Actinidia05622 Actinidia chinensis HOM05D004205 ORTHO05D004977 3.2e-07 59.7 155 36.1
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 3.2e-07 59.7 185 31.4
Haze_09457 Corylus avellana HOM05D004205 ORTHO05D004977 4.2e-07 59.3 214 28.0
Medtr2g013430 Medicago truncatula HOM05D004205 ORTHO05D004977 4.2e-07 59.3 112 35.7
A01p38730 Brassica napus HOM05D004205 ORTHO05D004977 5.5e-07 58.9 106 38.7
Gorai.006G087000 Gossypium raimondii HOM05D004205 ORTHO05D004977 5.5e-07 58.9 213 29.1
MBI17_g30523_MAGBIO Magnolia biondii HOM05D004205 ORTHO05D004977 7.1e-07 58.5 184 31.0
AL230U10030 Arabidopsis lyrata HOM05D004205 ORTHO05D004977 9.3e-07 58.2 198 25.3
Atru.chr10.1899 Acer truncatum HOM05D004205 ORTHO05D004977 1.2e-06 57.8 129 36.4
Gohir.D09G072000 Gossypium hirsutum HOM05D004205 ORTHO05D004977 1.2e-06 57.8 213 29.1
Phvul.006G186500 Phaseolus vulgaris HOM05D004205 ORTHO05D004977 1.2e-06 57.8 111 35.1
Potri.004G042100 Populus trichocarpa HOM05D004205 ORTHO05D004977 1.2e-06 57.8 144 35.4
Sabra04G0026200 Salix brachista HOM05D004205 ORTHO05D004977 1.2e-06 57.8 129 34.9
THA.LOC104818068 Tarenaya hassleriana HOM05D004205 ORTHO05D004977 1.2e-06 57.8 126 34.9
AL3G27930 Arabidopsis lyrata HOM05D004205 ORTHO05D004977 1.6e-06 57.4 198 24.7
TPR.G29053 Trifolium pratense HOM05D004205 ORTHO05D004977 2.1e-06 57.0 108 36.1
BcaB04g20928 Brassica carinata HOM05D004205 ORTHO05D004977 2.7e-06 56.6 106 38.7
BraA01t03912Z Brassica rapa HOM05D004205 ORTHO05D004977 2.7e-06 56.6 103 37.9
Prupe.4G184000 Prunus persica HOM05D004205 ORTHO05D004977 2.7e-06 56.6 214 26.6
BcaC09g48505 Brassica carinata HOM05D004205 ORTHO05D004977 3.5e-06 56.2 103 37.9
C01p49060 Brassica napus HOM05D004205 ORTHO05D004977 3.5e-06 56.2 103 37.9
BolC1t04869H Brassica oleracea HOM05D004205 ORTHO05D004977 3.5e-06 56.2 103 37.9
Thhalv10020594m.g Eutrema salsugineum HOM05D004205 ORTHO05D004977 4.6e-06 55.8 110 35.5


User provided reference genes

Program Settings