Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 9.0e-99 363.6 186 100.0
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 2.4e-80 302.4 184 84.8
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 3.0e-78 295.4 181 84.5
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.2e-63 246.9 168 77.4
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 1.9e-56 223.0 186 67.2
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 2.4e-51 206.1 194 60.8
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 6.5e-49 198.0 167 65.3
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 2.6e-45 186.0 161 63.4
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 1.9e-16 90.1 162 35.8
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 9.5e-16 87.8 180 38.9
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 4.7e-15 85.5 161 38.5
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 1.0e-14 84.3 177 35.6
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.4e-14 84.0 179 35.8
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 2.3e-14 83.2 174 32.2
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 3.1e-14 82.8 179 35.2
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 3.1e-14 82.8 183 31.1
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 6.8e-14 81.6 189 36.0
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 8.9e-14 81.3 176 34.7
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 8.9e-14 81.3 185 35.7
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 2.0e-13 80.1 182 36.3
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 2.6e-13 79.7 158 36.1
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 9.8e-13 77.8 182 31.3
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 1.7e-12 77.0 153 37.9
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.7e-12 77.0 159 37.1
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 2.9e-12 76.3 189 32.3
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 4.9e-12 75.5 185 33.5
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 8.3e-12 74.7 177 33.9
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 1.4e-11 73.9 149 36.9
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 1.4e-11 73.9 177 33.9
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 2.4e-11 73.2 118 40.7
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 3.2e-11 72.8 152 36.8
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 5.4e-11 72.0 175 33.1
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 7.0e-11 71.6 178 32.6
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 3.5e-10 69.3 177 33.3
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 1.7e-09 67.0 179 31.8
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 3.0e-09 66.2 157 32.5
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.6e-07 59.3 152 32.9
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 8.0e-07 58.2 181 24.9
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 8.0e-07 58.2 126 34.1
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 1.1e-06 57.8 182 29.7
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 1.8e-06 57.0 140 31.4
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 3.1e-06 56.2 121 31.4
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 5.2e-06 55.5 140 28.6
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 5.2e-06 55.5 149 31.5


User provided reference genes

Program Settings