Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 1.6e-136 490.0 245 100.0
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 1.0e-106 391.0 215 89.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.5e-105 387.1 215 89.3
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 9.3e-52 208.4 212 52.4
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 3.0e-50 203.4 212 49.5
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 9.7e-49 198.4 212 49.5
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 9.7e-49 198.4 213 51.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 9.7e-49 198.4 213 51.2
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 2.2e-48 197.2 213 48.8
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 6.3e-48 195.7 212 50.5
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.8e-47 194.1 212 48.1
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 2.4e-47 193.7 223 46.6
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 9.1e-47 191.8 212 48.6
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.2e-46 191.4 212 45.3
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.0e-46 190.7 231 45.0
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 2.6e-46 190.3 212 46.2
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 2.6e-46 190.3 226 48.2
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 4.5e-46 189.5 224 47.3
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 5.9e-46 189.1 219 47.0
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.3e-45 188.0 222 47.7
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 2.2e-45 187.2 224 45.1
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 2.2e-45 187.2 212 48.6
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.4e-44 184.5 221 46.2
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.9e-44 184.1 213 47.4
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 2.5e-44 183.7 194 50.0
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 2.5e-44 183.7 224 46.4
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.1e-43 180.6 222 44.6
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 2.7e-43 180.3 213 43.2
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 4.6e-43 179.5 212 44.8
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 6.1e-43 179.1 218 45.4
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 1.0e-42 178.3 209 45.5
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 1.8e-42 177.6 211 45.5
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.3e-42 177.2 212 45.3
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 3.0e-42 176.8 213 46.9
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 3.0e-42 176.8 209 45.9
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 6.7e-42 175.6 209 44.0
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 8.8e-42 175.3 212 46.2
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.5e-41 174.5 198 47.5
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 2.0e-41 174.1 209 44.0
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 5.7e-41 172.6 212 45.8
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 7.4e-41 172.2 212 44.8
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 9.7e-41 171.8 212 44.3
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.3e-40 171.4 231 44.2
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 1.1e-39 168.3 227 44.9
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.4e-39 167.9 212 48.6
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.3e-39 166.0 170 51.8
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.5e-38 164.5 170 51.8
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 2.6e-38 163.7 212 43.4
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 2.6e-38 163.7 219 41.1
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 5.9e-38 162.5 165 54.5
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.9e-37 160.2 170 50.0
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 3.8e-37 159.8 169 50.3
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 1.4e-36 157.9 179 49.2
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.4e-36 157.9 169 47.3
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 2.5e-36 157.1 171 49.7
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 2.5e-36 157.1 169 46.2
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 5.5e-36 156.0 244 40.2
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 2.1e-35 154.1 162 51.2
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-35 153.7 169 46.7
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-35 153.7 169 46.7
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 6.1e-35 152.5 244 39.3
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 1.8e-34 151.0 169 47.9
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.0e-34 150.2 171 48.0
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 5.2e-34 149.4 208 40.4
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 8.8e-34 148.7 239 39.3
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 2.6e-33 147.1 245 38.0
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 4.4e-33 146.4 169 46.2
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 4.8e-32 142.9 151 50.3
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.6e-30 137.9 170 46.5
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 3.5e-30 136.7 169 45.0
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.7e-29 134.4 146 47.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 3.8e-29 133.3 166 44.6
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.5e-28 130.6 124 53.2
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 7.2e-28 129.0 189 43.4
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 1.2e-27 128.3 120 50.8
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 3.0e-26 123.6 126 46.8
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 5.7e-25 119.4 155 45.2
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.0e-21 108.6 150 40.0
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 3.2e-20 103.6 98 52.0
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 5.5e-20 102.8 94 51.1
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 9.4e-20 102.1 98 52.0
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 5.2e-18 96.3 121 47.9
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 2.2e-16 90.9 143 37.8
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 8.0e-11 72.4 66 53.0
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 2.6e-09 67.4 66 48.5
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 2.6e-09 67.4 67 43.3
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 1.3e-08 65.1 60 50.0
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 1.8e-07 61.2 181 26.0
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 5.9e-06 56.2 141 25.5
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 7.8e-06 55.8 168 27.4
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 7.8e-06 55.8 161 23.6


User provided reference genes

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