Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 9.2e-56 219.9 107 100.0
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 2.0e-42 175.6 107 86.0
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.8e-22 109.4 89 59.6
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 3.0e-22 108.6 107 53.3
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 5.1e-22 107.8 85 58.8
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 5.1e-22 107.8 102 52.0
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.1e-21 106.7 89 59.6
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 1.9e-21 105.9 85 60.0
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 5.6e-21 104.4 87 56.3
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 5.6e-21 104.4 88 55.7
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 4.8e-20 101.3 94 56.4
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 4.8e-20 101.3 86 54.7
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 8.1e-20 100.5 89 55.1
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 1.8e-19 99.4 95 50.5
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 2.4e-19 99.0 107 48.6
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 3.1e-19 98.6 107 48.6
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 4.0e-19 98.2 88 52.3
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 5.3e-19 97.8 103 47.6
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 5.3e-19 97.8 107 45.8
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 9.0e-19 97.1 80 57.5
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 9.0e-19 97.1 92 50.0
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 1.2e-18 96.7 95 48.4
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 1.5e-18 96.3 95 49.5
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 1.5e-18 96.3 83 54.2
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 2.0e-18 95.9 81 56.8
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 2.0e-18 95.9 89 51.7
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 2.0e-18 95.9 98 53.1
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 2.0e-18 95.9 88 51.1
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 2.6e-18 95.5 105 47.6
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 3.4e-18 95.1 97 50.5
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 3.4e-18 95.1 78 60.3
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 5.8e-18 94.4 83 51.8
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 5.8e-18 94.4 83 51.8
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 5.8e-18 94.4 100 53.0
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 5.8e-18 94.4 95 50.5
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 7.6e-18 94.0 104 49.0
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 7.6e-18 94.0 104 45.2
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 9.9e-18 93.6 100 48.0
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 1.3e-17 93.2 104 46.2
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 1.7e-17 92.8 102 46.1
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 2.2e-17 92.4 102 52.9
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 2.9e-17 92.0 107 42.1
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 3.8e-17 91.7 85 52.9
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 4.9e-17 91.3 91 52.7
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 8.4e-17 90.5 107 44.9
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 8.4e-17 90.5 88 52.3
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 8.4e-17 90.5 80 52.5
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 1.1e-16 90.1 74 54.1
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 1.1e-16 90.1 101 46.5
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 1.9e-16 89.4 77 57.1
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 2.4e-16 89.0 89 48.3
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 3.2e-16 88.6 82 52.4
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 4.2e-16 88.2 104 46.2
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 4.2e-16 88.2 89 53.9
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 5.5e-16 87.8 80 51.2
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 7.1e-16 87.4 80 52.5
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 9.3e-16 87.0 74 56.8
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 9.3e-16 87.0 106 46.2
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 1.2e-15 86.7 95 45.3
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 1.6e-15 86.3 78 52.6
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 2.7e-15 85.5 89 48.3
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 3.5e-15 85.1 74 56.8
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 4.6e-15 84.7 106 40.6
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 4.6e-15 84.7 79 50.6
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 7.9e-15 84.0 88 46.6
Migut.O00539 Erythranthe guttata HOM05D006948 ORTHO05D008703 1.3e-14 83.2 104 47.1
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 1.3e-14 83.2 89 47.2
Migut.N01755 Erythranthe guttata HOM05D006948 ORTHO05D008703 1.8e-14 82.8 104 47.1
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 6.7e-14 80.9 74 54.1
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 1.1e-13 80.1 80 48.8
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 1.9e-13 79.3 72 55.6
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 2.5e-13 79.0 80 48.8
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 4.3e-13 78.2 79 46.8
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 4.3e-13 78.2 101 44.6
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 1.6e-12 76.3 83 47.0
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 1.6e-12 76.3 95 43.2
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 2.1e-12 75.9 83 47.0
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 3.7e-12 75.1 79 45.6
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 3.7e-12 75.1 80 48.8
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 3.7e-12 75.1 80 48.8
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 6.2e-12 74.3 83 49.4
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 6.2e-12 74.3 74 51.4
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 1.1e-11 73.6 70 48.6
Oeu035671.1 Olea europaea HOM05D006948 ORTHO05D008703 1.1e-11 73.6 83 45.8
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 1.4e-11 73.2 130 33.8
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.8e-11 72.8 77 49.4
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.8e-11 72.8 77 49.4
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 3.1e-11 72.0 61 50.8
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 3.1e-11 72.0 59 54.2
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 3.1e-11 72.0 59 54.2
SEGI_25204 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 6.9e-11 70.9 70 55.7
SEGI_39218 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 6.9e-11 70.9 70 55.7
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 6.9e-11 70.9 64 57.8
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 1.2e-10 70.1 83 45.8
FvH4_7g09680 Fragaria vesca HOM05D006948 ORTHO05D008703 1.2e-10 70.1 102 43.1
FAN06G1163 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.2e-10 70.1 102 43.1
FAN06G4415 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.2e-10 70.1 102 43.1
ClCG05G000390 Citrullus lanatus HOM05D006948 ORTHO05D008703 2.0e-10 69.3 76 44.7
HPP92_014505 Vanilla planifolia HOM05D006948 ORTHO05D008703 2.0e-10 69.3 85 40.0
ATR0767G212 Amborella trichopoda HOM05D006948 ORTHO05D008703 3.4e-10 68.6 62 54.8
SalBow5G2465 Salvia bowleyana HOM05D006948 ORTHO05D008703 4.5e-10 68.2 67 47.8
SalBow5G5528 Salvia bowleyana HOM05D006948 ORTHO05D008703 4.5e-10 68.2 67 47.8
Psat3g154680 Pisum sativum HOM05D006948 ORTHO05D008703 5.8e-10 67.8 75 45.3
Sc23g0003950 Simmondsia chinensis HOM05D006948 ORTHO05D008703 7.6e-10 67.4 54 55.6
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 1.3e-09 66.6 76 44.7
SHI13603 Sapria himalayana HOM05D006948 ORTHO05D008703 2.2e-09 65.9 59 50.8
TAR629G0288 Trochodendron aralioides HOM05D006948 ORTHO05D000005 2.2e-09 65.9 67 47.8
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 1.1e-08 63.5 79 44.3
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 1.4e-08 63.2 62 45.2
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 3.2e-08 62.0 78 42.3
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 1.0e-06 57.0 50 54.0
DCAR_025075 Daucus carota HOM05D006948 ORTHO05D008703 2.3e-06 55.8 65 40.0
Pp3c5_22300 Physcomitrium patens HOM05D006948 ORTHO05D008703 6.7e-06 54.3 77 37.7


User provided reference genes

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