Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 2.5e-278 961.4 488 100.0
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 6.6e-85 318.9 508 44.9
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.4e-82 310.5 460 43.7
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 2.5e-63 247.3 531 36.7
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 1.6e-62 244.6 492 37.2
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 4.6e-62 243.0 493 37.7
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.0e-61 241.9 494 37.7
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 6.7e-61 239.2 454 40.3
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 8.7e-61 238.8 503 38.2
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 3.3e-60 236.9 515 36.3
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 9.6e-60 235.3 506 36.8
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 4.8e-59 233.0 510 37.1
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 4.8e-59 233.0 525 37.0
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 4.8e-59 233.0 501 37.3
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 3.1e-58 230.3 499 37.3
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 3.4e-57 226.9 466 38.6
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 5.9e-57 226.1 505 35.0
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 1.3e-56 224.9 462 37.7
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 8.5e-56 222.2 495 36.4
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.1e-54 217.6 490 37.3
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 6.1e-54 216.1 470 37.9
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 3.9e-53 213.4 475 37.9
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 3.9e-53 213.4 495 36.2
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 6.7e-53 212.6 522 34.5
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 6.7e-53 212.6 493 37.3
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 8.7e-53 212.2 507 34.3
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 8.7e-53 212.2 505 36.4
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 1.9e-52 211.1 506 34.8
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 3.3e-52 210.3 480 35.4
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 3.3e-52 210.3 480 35.4
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 3.3e-52 210.3 525 34.5
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 5.7e-52 209.5 464 38.4
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 7.4e-52 209.1 485 36.3
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 7.4e-52 209.1 497 36.0
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.6e-51 208.0 476 35.1
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.2e-51 207.6 466 36.3
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 4.8e-51 206.5 493 36.7
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 6.3e-51 206.1 493 35.5
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 6.3e-51 206.1 496 34.1
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.8e-50 204.5 480 35.0
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 2.4e-50 204.1 500 34.8
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 9.1e-50 202.2 488 36.1
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.8e-48 196.8 445 36.2
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.5e-47 194.1 506 33.4
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.7e-46 190.7 500 32.6
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.7e-46 190.7 500 32.8
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 4.6e-46 189.9 480 33.3
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.0e-45 188.7 515 32.4
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 1.8e-45 188.0 522 33.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.3e-45 187.6 497 34.6
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 1.3e-43 181.8 502 32.3
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 3.7e-43 180.3 455 35.8
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.1e-42 177.2 473 33.6
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 4.1e-42 176.8 493 33.3
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 6.9e-42 176.0 480 35.0
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 6.9e-42 176.0 520 33.8
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 6.9e-42 176.0 485 33.4
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 9.1e-42 175.6 474 34.0
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.5e-41 174.9 474 35.2
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 5.9e-41 172.9 473 32.1
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 5.9e-41 172.9 507 34.1
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 5.9e-41 172.9 483 33.3
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 1.9e-39 167.9 479 32.6
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 2.5e-39 167.5 452 34.1
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 3.2e-39 167.2 479 34.4
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 7.2e-39 166.0 455 33.0
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 3.9e-37 160.2 454 32.8
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.0e-36 157.9 447 30.4
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 2.0e-36 157.9 450 33.1
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 3.3e-36 157.1 455 30.5
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 1.3e-35 155.2 466 34.3
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.7e-35 154.8 498 33.3
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.2e-35 154.5 521 31.1
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 4.8e-35 153.3 493 32.3
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 6.3e-35 152.9 424 32.8
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 8.2e-35 152.5 453 32.5
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 1.8e-34 151.4 484 32.4
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 4.1e-34 150.2 513 30.6
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 5.3e-34 149.8 492 30.9
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 5.3e-34 149.8 489 32.5
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.3e-32 145.2 512 31.6
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 8.5e-32 142.5 446 30.7
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.2e-31 140.2 473 30.7
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 7.2e-31 139.4 383 32.9
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 8.0e-30 136.0 495 31.1
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 3.0e-29 134.0 406 31.5
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 8.2e-27 125.9 478 29.3
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 1.4e-26 125.2 487 31.2
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.8e-26 124.8 505 29.1
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 7.0e-26 122.9 491 30.3
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 4.5e-25 120.2 463 28.7
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 5.9e-25 119.8 480 31.0
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 5.5e-23 113.2 311 34.7
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 1.2e-22 112.1 341 31.7
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 3.6e-22 110.5 439 27.8
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 4.7e-22 110.2 309 33.3
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 4.7e-22 110.2 309 33.3
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 6.1e-22 109.8 319 33.2
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.3e-21 107.8 156 42.9
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 3.4e-20 104.0 263 33.8
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 1.7e-19 101.7 174 39.7
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 2.2e-19 101.3 653 24.5
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 8.3e-19 99.4 488 27.5
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 4.5e-17 93.6 391 29.2
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 1.9e-07 61.6 131 31.3
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 1.9e-07 61.6 131 31.3
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 2.5e-07 61.2 131 35.9
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 2.1e-06 58.2 165 31.5


User provided reference genes

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